| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1425 |
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| Symbol | |
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| ID | 6176945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 1581876 |
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| End bp | 1583435 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641681182 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001808129 |
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| Protein GI | 172060477 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0184869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACAGG CTCCAGTCTC CCACCCGCCC CTGCAGGGCG GGCAACTCGT GCTCGGGACG
ATCGCGGTAT CGCTCGCGGT GTTCATGAAC GTGCTCGACA CGTCCATCGC GAACGTCGCG
ATCCCGACCA TCTCGGGCGA CCTCGGCGTA TCGTCCGACC AGGGTACGTG GGTCATCACG
TCGTTCGCGG TCGCGAACGC GATCTCCGTG CCGCTGACGG GCTGGCTGAC CGATCGCTTC
GGACAGGTTC GCCTGTTCCT CGCGTCGATC ATCCTGTTCG TCATCTCGTC GTGGATGTGC
GGGCTGGCGC CGAGCCTGCC GTTCCTGCTC GCGTCGCGCG TGCTCCAGGG CGCGGTAGCG
GGCCCGATGA TTCCGCTGTC GCAATCGCTG CTGCTGTCGA GCTACCCGCG CGCGAAGGCG
CCGATGGCGC TCGCGCTGTG GTCGATGACG ACGCTGATCG CACCGGTCGC CGGCCCGATC
CTCGGCGGCT GGATCTCCGA CAACTATTCG TGGCCGTGGA TTTTCTACGT GAACATCCCG
GTCGGCATCG CCGCCGCGCT GGCCACGTGG TCGATCTATC GCACGCGCGA ATCGACGGTG
CGCCGCGCGC CGATCGACGG CGTCGGCCTC GCGCTGCTCG TGCTTTGGGT CGGTTCGCTG
CAGATCATGC TCGACAAGGG CAAGGATCTC GACTGGTTCG CGTCGACGAC GATCATCGCG
CTCGCTCTGA TCGCGGTCAT TTCGTTCGCG TTCTTCGTGA TCTGGGAGCT GACCGCCGAA
CATCCGGTCG TCGACCTGTC GCTGTTCCGG ATGCGCAATT TCACGGGCGG CACGATCGCG
CTCGCGGTCG GCTACGGGCT CTACTTCGGC AACCTCGTGC TGCTGCCGCT GTGGCTGCAG
ACGCAGATCG GCTACACGGC CACCGATGCG GGTCTCGTGA TGGCGCCCGT CGGGCTGTTC
GCGATCCTGC TGTCGCCGCT GACCGGCAAG TTCCTGCCGC GCACGGACCC GCGCTATATC
GCGACCGCCG CATTCCTGAC GTTCGCGCTG TGCTTCTGGA TGCGCTCGCG CTATACGACC
GGCGTCGACG AGTGGTCACT GACGCTGCCG ACGCTCGTGC AAGGCATCGC GATGGCCGGC
TTCTTCATCC CGCTCGTGTC GATCACGCTG TCCGGCCTGC CCGGCCATCG CATTCCTGCC
GCATCCGGCC TGTCGAACTT CGTGCGGATC ATGTGCGGCG GCATCGGCAC GTCGATCTTC
CAGACCGCGT GGGATCACCG GAACAACTTC CACCACGCTC AACTGGTCGA GCAGGCGAAC
CCGTACAACC CGACGTTCAA CCAGGCCGTC ACGCAGATGG GCAACCTGGG GCTGACACAG
AACCAGGCGC ACGGCCTCAT CAACAACATG GCCACGCAGC AGGCCGCGCA GCTCGGCGTG
AACGATCTGT TCTATATTTC GGCGGCGATC TTCGTGCTGC TGATCGGACT GATCTGGATC
ACGAAGCCCG AACGCGCGGG CGGCGGCGAT GCGGGCGCGG CGGCGTCGGC TGCGCACTGA
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| Protein sequence | MAQAPVSHPP LQGGQLVLGT IAVSLAVFMN VLDTSIANVA IPTISGDLGV SSDQGTWVIT
SFAVANAISV PLTGWLTDRF GQVRLFLASI ILFVISSWMC GLAPSLPFLL ASRVLQGAVA
GPMIPLSQSL LLSSYPRAKA PMALALWSMT TLIAPVAGPI LGGWISDNYS WPWIFYVNIP
VGIAAALATW SIYRTRESTV RRAPIDGVGL ALLVLWVGSL QIMLDKGKDL DWFASTTIIA
LALIAVISFA FFVIWELTAE HPVVDLSLFR MRNFTGGTIA LAVGYGLYFG NLVLLPLWLQ
TQIGYTATDA GLVMAPVGLF AILLSPLTGK FLPRTDPRYI ATAAFLTFAL CFWMRSRYTT
GVDEWSLTLP TLVQGIAMAG FFIPLVSITL SGLPGHRIPA ASGLSNFVRI MCGGIGTSIF
QTAWDHRNNF HHAQLVEQAN PYNPTFNQAV TQMGNLGLTQ NQAHGLINNM ATQQAAQLGV
NDLFYISAAI FVLLIGLIWI TKPERAGGGD AGAAASAAH
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