Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0676 |
Symbol | |
ID | 6177799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 763895 |
End bp | 764437 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641680423 |
Product | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase |
Protein accession | YP_001807388 |
Protein GI | 172059736 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase |
TIGRFAM ID | [TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.152454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTTG CATATATCGG ACTGGGGGCG AATCTCGGCG ATGCACGCCA GACCCTGAAG GACGCGGTGG TGTGCCTTGC GCAGCAGCGC ACCATCTCGA TCCTGGGCAA GTCGAGCCTG TATCGCACGG CGCCCTTCGA GGCGGGCGGC GACGATTACT ACAACTGCGT CGTCAAGCTC GACACGACGC TGTCGGCCCG GGAGCTGCTC GCGCTCTGCC AGAAGATCGA ACATCACTTC GGGCGCGAGC GCCCGTATCG CAACGCGCCG CGCACGCTCG ACCTCGACAT CCTGCTGTTC GGCACCGACT CGATCGACGA ACCCGACCTG ATCGTCCCGC ATCCGCGCCT CACCGACCGC GCCTTCGCGC TCGTGCCGCT CGTCGAGATC GAGCCGGCGC TCGACATCCC GGCGCGCGGC CGCGCCGATG CGTTCCTCGC CGCCGTCGCC GACCAGCGCG TCGAGAAGGT GCAGACCTGT CAATGCCTGA TGCAGAAGGC CCTGGCCGCC GGCGCAGACG CCGACAAGAA CCGCTGCCCA TGA
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Protein sequence | MTVAYIGLGA NLGDARQTLK DAVVCLAQQR TISILGKSSL YRTAPFEAGG DDYYNCVVKL DTTLSARELL ALCQKIEHHF GRERPYRNAP RTLDLDILLF GTDSIDEPDL IVPHPRLTDR AFALVPLVEI EPALDIPARG RADAFLAAVA DQRVEKVQTC QCLMQKALAA GADADKNRCP
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