Gene BamMC406_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0625 
Symbol 
ID6178818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp704189 
End bp704911 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content74% 
IMG OID641680373 
Producthypothetical protein 
Protein accessionYP_001807338 
Protein GI172059686 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.435543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC GCGTGAACGG TTTCGCGAGC GGCGCGGCGG CGGCTGTCGC CGTGCTCGCG 
CTCGCCGCGT GCAGCTCGCC GCCCGCGCGG TTCTACACGC TGAGCCCGGC CGGCGCCACG
GCCGCCGTGC GCACCGCGCC GGCCAACCCG CCATTCCTGA TCGAGGTGCC GTCCGTCGGC
GTGCCCGAGC AGGTCGCGAA GAACCAGCTC GTCGTGCAGA AGAATGGCGC GCAGGTCGAC
GTGCTCGAAC AGGAGCGCTG GGCCGCGCCG CCCGCCGACG AGATCCGCCG CGCGCTGTCC
GACGATCTCG CCGCGCAGCT CGACACGATC GACGTCGCGA ATTCCGCGTA CCCGGTCGGC
GTGCCCGTCT ATCGGATCAG CGTGAACCTG CAGCGCTTCG ATTCGTGGCC CGGCAAGCGG
GCGGCGATCG ATGCGGTGTG GAGCGTGCGC GCGCTCGGCA CGCAGGCGGT GATGACGTGC
CGCACGAGCG TCGCGGAACC GGTCGGCGAT GGCTACGACG CGCTCGTCGC CGGCCACCGG
CGCGCGCTCG ACGTGATTGC GTCGCAGGCA GCGGCCGGCG TGCGTGCGAT GGTAGCGCAG
CGCGATGCGA CGGCGACGCG GACCGCGTCG GCCAAGGCAA CGGCCACCGC GCCCGTGCTG
CCCTGCCCGG CCAATCCGAC GTCAGGCGGC GACGCGGGCG CGACCGGCAA GTCCGGCGCG
TAA
 
Protein sequence
MTTRVNGFAS GAAAAVAVLA LAACSSPPAR FYTLSPAGAT AAVRTAPANP PFLIEVPSVG 
VPEQVAKNQL VVQKNGAQVD VLEQERWAAP PADEIRRALS DDLAAQLDTI DVANSAYPVG
VPVYRISVNL QRFDSWPGKR AAIDAVWSVR ALGTQAVMTC RTSVAEPVGD GYDALVAGHR
RALDVIASQA AAGVRAMVAQ RDATATRTAS AKATATAPVL PCPANPTSGG DAGATGKSGA