| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0276 |
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| Symbol | rplC |
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| ID | 6177775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 327957 |
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| End bp | 328607 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641680021 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001806993 |
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| Protein GI | 172059341 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000000762346 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.121842 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCTTG GACTCGTAGG TCGCAAGGTT GGCATGACCC GTATCTTCAC GGCTGAAGGG
GATTCGATTC CCGTCACCGT GCTGGACGTG TCGGACAACC GCGTGACGCA GATCAAGACT
GTTGAAACCG ACGGCTACAC GGCCGTGCAG GTTGCATTCG GCTCCCGCCG CGCATCGCGC
GTGACGAAGC CGCTGGCAGG TCATCTCGCC AAAGCCGGTG TCGAAGCCGG TGAAATCCTC
AAGGAATTCC GCATTGACGC GGCCAAGGCA GCCGAGCTGT CGAATGGCGC CGTCGTCGGT
GCCGATCTTT TCGAAGTAGG CCAGAAGGTC GACGTGCAAG GCGTGTCGAT CGGTAAGGGC
TACGCCGGTA CGATCAAGCG TTACAACTTC TCCTCCGGCC GTGCCACGCA CGGTAACTCG
CGCTCGCACA ACGTGCCGGG CTCGATCGGT ATGGCGCAGG ATCCGGGTCG CGTTTTCCCG
GGTAAGCGCA TGACGGGTCA CCTCGGTGAC GTTACGGTGA CGGTGCAGAA CCTCGAAATC
GCTCGTATCG ACGCAGAGCG CAAGCTGCTG CTCGTCAAGG GCGCGATTCC GGGCGCGAAG
GGCGGCAAGG TTTTCGTGAC GCCGGCCGTC AAGACCAAGG GGGCGAAATA A
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| Protein sequence | MSLGLVGRKV GMTRIFTAEG DSIPVTVLDV SDNRVTQIKT VETDGYTAVQ VAFGSRRASR
VTKPLAGHLA KAGVEAGEIL KEFRIDAAKA AELSNGAVVG ADLFEVGQKV DVQGVSIGKG
YAGTIKRYNF SSGRATHGNS RSHNVPGSIG MAQDPGRVFP GKRMTGHLGD VTVTVQNLEI
ARIDAERKLL LVKGAIPGAK GGKVFVTPAV KTKGAK
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