Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS668_3640 |
Symbol | |
ID | 4883985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 668 |
Kingdom | Bacteria |
Replicon accession | NC_009074 |
Strand | + |
Start bp | 3565501 |
End bp | 3566286 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640129568 |
Product | hypothetical protein |
Protein accession | YP_001060645 |
Protein GI | 126441100 |
COG category | [S] Function unknown |
COG ID | [COG3455] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00234142 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTACG CGCCCTCCCT CTTCGGCGGC AACACGCCGC CCCCCGCGCC GCAAACGGCT TCGTCGACCG ACGCCGGCTT CCAGGCGCGC TCGCTCGTCG ATCTGCTGTA CGACGGCTTC TTCATGCTGT TCCTGCTGAA GAACGGCCGC GAGCCGAACG ACGCGTCGGA ATTCGGCACG CGCATTCAGG AATTCCTGAG CGAGTTCGAA CGCGGCGCGA AGAAGCTCAA CATCGCCGCC GACGACGTCT ATGCGGCGAA GTTCGCGTTT TGCGCGGCGA TCGACGAATC GGTGCTGTCG TCGCCGTTCA AGATCCGCGC GGACTGGGAG CGCCGGCCGT TGCAGCTCGT GCTGTTCGGC GAGCAACTCG CGGGCGAGAA GTTCTATCAG TACCTCGAAG AATGCCGCGC GCAGGGCGCG GCGCGGCTGC AGTCGCTCGA GGTGTTCCAT ATGTGCCTGC TGCTCGGCTT CCAGGGCAAG TATCTGCTCG AAGGGCCGGA AAAGCTCGCG TATCTGACCG CACGGCTTGG CGACGAGATC GCGAACATGA AGGGCAAGCG CGCACCGTTC GCGCCGCATT GGCCGCTGCC GGACCAGATC TCGCACCGGC TCAAGCGCGA GGTGCCGCTG TGGGCGATCG GAGCGGTGTT CGCGCTCGTC GGGCTGCTGG CGTTCGTCGG GCTGAATACG TATTTGAAAG ACAGCACCGT GCGGGCGCTC GCGCCTTATT CGCAAGTCAT CAAGGTGGGG CCGGAGTCGG CTAATTTGAC GATTTCGTTG CCTTGA
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Protein sequence | MSYAPSLFGG NTPPPAPQTA SSTDAGFQAR SLVDLLYDGF FMLFLLKNGR EPNDASEFGT RIQEFLSEFE RGAKKLNIAA DDVYAAKFAF CAAIDESVLS SPFKIRADWE RRPLQLVLFG EQLAGEKFYQ YLEECRAQGA ARLQSLEVFH MCLLLGFQGK YLLEGPEKLA YLTARLGDEI ANMKGKRAPF APHWPLPDQI SHRLKREVPL WAIGAVFALV GLLAFVGLNT YLKDSTVRAL APYSQVIKVG PESANLTISL P
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