Gene BURPS1710b_3250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_3250 
SymbolglyA 
ID3688460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp3555517 
End bp3556764 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content65% 
IMG OID637729705 
Productserine hydroxymethyltransferase 
Protein accessionYP_334622 
Protein GI162210029 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGACA GAGCCCAAAG CACCATTGCG AACGTCGATC CCGAGATCTG GCAAGCGATT 
CAGCAGGAAA ACGTCCGTCA GGAAGAGCAC ATCGAGCTGA TCGCGTCGGA GAATTACACG
AGCCCGGCCG TGATGGCGGC GCAAGGCTCG CAACTGACGA ACAAGTACGC GGAAGGCTAT
CCGGGCAAGC GCTATTACGG CGGCTGCGAA TACGTGGACA TCGTCGAGCA GCTCGCGATC
GATCGCGTGA AGGCGCTGTT CGGCGCCGAA GCGGCGAACG TGCAGCCGAA CTCGGGCTCG
CAGGCGAACC AGGGCGTGTT CTTCGCGATG CTCAAGCCGG GCGACACGAT CATGGGCATG
AGCCTCGCGC ACGGCGGCCA CCTCACGCAC GGCTCGCCGG TGAACATGTC GGGCAAGTGG
TTCAACGTCG TGAGCTACGG GCTGAACGAG GCTGAAGACA TCGATTACGA AGCGGCCGAG
CAGCTCGCGC ACGAGCACAA GCCGAAGCTG ATCGTCGCGG GCGCGTCGGC GTTCGCGCTG
AAGATCGATT TCGAGCGCCT CGCGAAGATC GCCAAGGCAG TGGGCGCGTA CCTGATGGTC
GACATGGCGC ACTACGCGGG CCTGATCGCG GCGGGTGTCT ATCCGAACCC GGTGCCGCAT
GCGGATTTCG TCACGACGAC GACGCACAAG AGCCTGCGCG GCCCGCGCGG CGGCGTGATC
CTGATGAAGG CCGAGTACGA GAAGCAGATC AACTCGGCGA TCTTCCCGGG CATCCAGGGC
GGACCGCTGA TGCACGTGAT CGCCGCGAAG GCCGTCGCGT TCAAGGAAGC GCTGTCGCCG
GAATTCAAGG AATACCAGCA GAAGGTGGTC GAGAACGCCC GCGTGCTGGC GCAAACGCTC
GTCAAGCGCG GCCTGCGCAT CGTGTCGGGC CGCACCGAGA GCCATGTGAT GCTGGTCGAC
CTGCGCGCGA AGAACATCAC GGGCAAGGCG GCGGAAGCGG CGCTCGGCAA TGCGCACATC
ACGGTCAACA AGAACGCGAT CCCGAACGAT CCGGAGAAGC CCTTCGTGAC GAGCGGCGTG
CGCCTGGGCT CGCCGGCGAT GACGACGCGC GGCTTCGGCC CGCAGGAAGC GGAGCTCGTC
GGCAACCTGA TCGCCGACGT GCTCGAGCAT CCCGAAGACG CGGCGACGAT CGAGCGCGTG
CGTGCGCAGG TCGCCGAGCT GACGAAGCGT TTCCCGGTCT ATCGCTGA
 
Protein sequence
MFDRAQSTIA NVDPEIWQAI QQENVRQEEH IELIASENYT SPAVMAAQGS QLTNKYAEGY 
PGKRYYGGCE YVDIVEQLAI DRVKALFGAE AANVQPNSGS QANQGVFFAM LKPGDTIMGM
SLAHGGHLTH GSPVNMSGKW FNVVSYGLNE AEDIDYEAAE QLAHEHKPKL IVAGASAFAL
KIDFERLAKI AKAVGAYLMV DMAHYAGLIA AGVYPNPVPH ADFVTTTTHK SLRGPRGGVI
LMKAEYEKQI NSAIFPGIQG GPLMHVIAAK AVAFKEALSP EFKEYQQKVV ENARVLAQTL
VKRGLRIVSG RTESHVMLVD LRAKNITGKA AEAALGNAHI TVNKNAIPND PEKPFVTSGV
RLGSPAMTTR GFGPQEAELV GNLIADVLEH PEDAATIERV RAQVAELTKR FPVYR