| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0486 |
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| Symbol | |
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| ID | 3847038 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 538242 |
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| End bp | 539783 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637840159 |
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| Product | RNA polymerase factor sigma-54 |
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| Protein accession | YP_441043 |
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| Protein GI | 83718503 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAACT TCCGGTATGA CTTCCCTTTT GCCATGAAAG CCAGTCTCCA ACTTCGCCTG
TCGCAGCATC TCGCGCTCAC GCCCCAGCTT CAGCAATCGA TCCGGCTGCT GCAGTTGTCG
ACGCTCGAAC TGCAGCAGGA AGTCGCAACG GCGATCGCGC AGAACCCGCT GCTCGAGAAC
GACGACGACT GGATCGCGAG CCCCCTGCGC GTCGCGGCCG ACGGCTCGGT GATCGCGCAG
ACGCCCGCGT CGTCCTCGCC CGAGCCGATG TCCGGCGCGT CGAACGGCAC GACTGCGACG
AATGAGCGCA CCGAGCGCGA CGAAACCGCC GGCGTCGACG AATACGACGG CTATTCGGCC
GACGGCGGCG ACGCGAGCCA GTGGAATCTC GACGACTTCG GCCGCTCCCC CGCCGCATCC
GACGACGACG ATCTGCCGCC GATGCAGATC CACGAAACCT CGACGTCGCT GCGCGATCAT
CTGATGGCGC AGTTGCGCGT CACGCAGGCG AGCCCGCGCG ATCGCGCGCT CGTCACGTTC
CTGATCGAAT CGCTCGACGA CGACGGCTAC CTGAGCGCGT CGCTCGACGA AGTGCTCGCC
GATCTGCCGG CGGAGCTCGA AGTCGACGTC GACGAACTGA ACGCGGCGCT CGCGCTCGTG
CACAGCTTCG ATCCGGCGGG CGTCGGCGCG CGGTCCGCGT CCGAATGCCT GAAGCTGCAG
TTGCTGCGGC TGGATCCGTC CCCGACGCGC ACGCTCGCGC TCGATATCGT GTCGCAGCAT
CTCGAACTGC TTGCCGCGCG CGATTTCACG CGCCTGCGCA AGCAACTGAA GGCGACCGAC
GACGAGCTGC GCGACGCGCA CGCGCTGATC CGCTCGCTCG AGCCGTTTCC CGGCGCGGCG
TACGGCAAGG CCGAAGCCGA TTACGTGGTG CCCGACATCA TCGTGAAGAA GGCCGGCCAG
AGCTGGCAGG CGGAACTCAA TCCGGAAGTG GTGCCGAAGC TGCGTATCAA CCATCTTTAC
GCGAACATCC TGCGCAACAG CCGGGGCGAT CCGAGCGCGG GATCGCTGAA GCAGCAGCTT
CAGGAAGCGC GCTGGCTGAT CAAGAATATT CAGCAGCGGT TCGAGACGAT CCTGCGGGTC
GCGCAGGCGA TTGTCGAACG TCAGAAGAAT TTCTTCGCGC ACGGCGAAAT TGCGATGCGC
CCCTTGGTTT TGCGGGAAAT AGCTGATACG CTGGGCCTAC ACGAGTCGAC TGTCTCCCGT
GTGACAACCG GCAAGTACAT GCTGACTCCG TTCGGCACAC TTGAATTTAA GTACTTCTTC
GGGTCGCACG TATCGACAGA CACCGGAGGT GCCGCGTCGT CGACAGCGAT CCGCGCCCTC
ATCAAACAAC TGATAGGAGC CGAAGACCCC AAATCCCCTC TTTCGGACAG TCGCATAGCC
GAGCTGCTAG CGGAACAAGG GTTCGTGGTC GCGCGCCGCA CGGTTGCCAA ATATCGCGAA
GCCCTCAAGA TCCCGGCGGT GAATCTGCGC AAGTCTCTGT AG
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| Protein sequence | MANFRYDFPF AMKASLQLRL SQHLALTPQL QQSIRLLQLS TLELQQEVAT AIAQNPLLEN
DDDWIASPLR VAADGSVIAQ TPASSSPEPM SGASNGTTAT NERTERDETA GVDEYDGYSA
DGGDASQWNL DDFGRSPAAS DDDDLPPMQI HETSTSLRDH LMAQLRVTQA SPRDRALVTF
LIESLDDDGY LSASLDEVLA DLPAELEVDV DELNAALALV HSFDPAGVGA RSASECLKLQ
LLRLDPSPTR TLALDIVSQH LELLAARDFT RLRKQLKATD DELRDAHALI RSLEPFPGAA
YGKAEADYVV PDIIVKKAGQ SWQAELNPEV VPKLRINHLY ANILRNSRGD PSAGSLKQQL
QEARWLIKNI QQRFETILRV AQAIVERQKN FFAHGEIAMR PLVLREIADT LGLHESTVSR
VTTGKYMLTP FGTLEFKYFF GSHVSTDTGG AASSTAIRAL IKQLIGAEDP KSPLSDSRIA
ELLAEQGFVV ARRTVAKYRE ALKIPAVNLR KSL
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