| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BT9727_1490 |
|---|
| Symbol | |
|---|
| ID | 2854344 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus thuringiensis serovar konkukian str. 97-27 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_005957 |
|---|
| Strand | + |
|---|
| Start bp | 1574152 |
|---|
| End bp | 1575702 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637512920 |
|---|
| Product | sodium/solute symporter family protein; sodium/proline symporter |
|---|
| Protein accession | YP_035822 |
|---|
| Protein GI | 49481723 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4147] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.0960795 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATACGA CTGCATTTGC ACTATTTTTA ATTATTGTCC TTGGTACGCT CGTCATAACC
TATTTTGCAT CGAAAAAAAC GAAAAATGCG AGTGAGTTTT ATACAGCTGG AGGGGGATTA
ACTGGTTGGC AAAATGGTCT GGCCATTGCG GGAGATTATA TGTCTGCTGC GTCTTTTCTT
GGTATAGCTG GAGCGATCGC GTTAACTGGT TTTGATGGTT TCTTTTATAG TATTGGCTTT
TTAGTTGCTT ATTTAGTTGT TCTATACCTT GTAGCAGAAC CACTAAGGAA TTTAGGAAAG
TACACGTTAG CGGATATGAT TGCGGCGCGT TTTGATGCGA AAAAAGTTCG TGGAGTTGCA
GCGCTTAATA CGATGACGAT TTCAATTTTT TATATGATTG CACAATTAGT TGGGGCGGGT
GCACTTATTA AGTTATTATT AGGGATTGAA TATACGACAT CTGTTTTAAT TGTTGGTACA
TTAATGACAG TGTACGTTAT TTTTGGCGGA ATGACCGCGA CGAGCTGGGT ACAAATCGTT
AAGGCTGTAT TACTTATGGC TGGTACATTT ATTATTTCTG TTATCGTTTT CGCAAAATTT
AATTTTAGTG TGACTGAAAT GTTCGCTCAA ATGAAAACTG CTACTCCATT AAAAGATTCG
TTTTTAAATC CAGGAGTAAA GTATAAGGAT GGTCTTGATA CGCTATCTTT AAATTTAGGA
CTAGTCCTTG GTACAGCAGG ATTACCACAC ATTCTTGTTC GCTTTTTTAC TGTACGTGAT
GCAAAAACAG CACGTCAATC TGTAGTATAC GCTACGTGGT TAATTGGCGC ATTTTATATT
ATGACAATTT TCTTAGGATT TGGGGCAGCG GCGTTTGTAG GGAATGAGGC GATTATGAAA
GCAAACCCTG CTGGTAATAT GGCAGCACCT TTATTAGCTA AAGCATTGGG CGGAGATTTC
TTATTTGCTT TCGTATCAGC AATTGCCTTT GCAACGATTT TAGCTGTAGT GGCAGGCCTT
GTATTAACAG CAGCATCAGC ATTCGCACAT GATTTTTATA ACGAAATTAT TCGCAAGGGG
AAATCAACGG AAAAAGAGCA AGTATCCATG GCTCGTTATG CGTCTATTGG AGTAGCGGTA
TTATCTATTA TACTAGCGTT ATTTGCTCAA ACATTGAACG TAGCATTTTT AGTTTCATTA
GCATTTGCAG TTGCAGCGAG TACAAACTTG CCAGTTATAT TATTTACAAT ATATTGGAAG
CGTTTTAATA CGACAGGTGC CATCTCGGGT ATGATTGTTG GTCTTGTATC AGCCATTGTT
CTCGTAGCGT TAAGCCCAAA TGTTTGGAGC CCTGTAGCTG GAAAAGCTAT ATTTGTTGGG
GAAGCGATAT TCCCATATAC GACACCTGGA ATTATTTCGA TCCCGCTCGG ATTTCTTGCA
GCATATTTAG GAACCGTGTT ATCTAGTAAA AAAGAAGATG CAGCGAAATT TGATGAAATT
CTTGTGAAAT CAAATACTGG TCATGGTATT AGTGATGCGT CTTCGCATTA A
|
|---|
| Protein sequence | MNTTAFALFL IIVLGTLVIT YFASKKTKNA SEFYTAGGGL TGWQNGLAIA GDYMSAASFL
GIAGAIALTG FDGFFYSIGF LVAYLVVLYL VAEPLRNLGK YTLADMIAAR FDAKKVRGVA
ALNTMTISIF YMIAQLVGAG ALIKLLLGIE YTTSVLIVGT LMTVYVIFGG MTATSWVQIV
KAVLLMAGTF IISVIVFAKF NFSVTEMFAQ MKTATPLKDS FLNPGVKYKD GLDTLSLNLG
LVLGTAGLPH ILVRFFTVRD AKTARQSVVY ATWLIGAFYI MTIFLGFGAA AFVGNEAIMK
ANPAGNMAAP LLAKALGGDF LFAFVSAIAF ATILAVVAGL VLTAASAFAH DFYNEIIRKG
KSTEKEQVSM ARYASIGVAV LSIILALFAQ TLNVAFLVSL AFAVAASTNL PVILFTIYWK
RFNTTGAISG MIVGLVSAIV LVALSPNVWS PVAGKAIFVG EAIFPYTTPG IISIPLGFLA
AYLGTVLSSK KEDAAKFDEI LVKSNTGHGI SDASSH
|
|---|
| |