| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BRA0692 |
|---|
| Symbol | |
|---|
| ID | 1165134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brucella suis 1330 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004311 |
|---|
| Strand | - |
|---|
| Start bp | 671017 |
|---|
| End bp | 672066 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637331796 |
|---|
| Product | sugar ABC transporter, permease protein, putative |
|---|
| Protein accession | NP_699873 |
|---|
| Protein GI | 23500433 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0072223 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGATAT GCCCGCCTCA CCATCCGAGG CGCGTTTCGT GGGACATAGA GCTGTTCCGG
TTAAAACGGA ATCGCCGGAA CCGCTCTAAC TATTTGTTTT GTCGCATTTT CCAACGCAAA
ACCGTTTCAC ACTTTTGGCT TGAAAATGCT CTAGACAAGG TGGCGCATAT GCAGCGTAAC
AACCGATTAC AGGCACTGGT GCCCAAGCTG GTTTTGGGGC CAAGCTTTCT GATCGTACTC
GTCTTCGTTT ACGGGTTCAT CATCTATACG GGCGTTCTGT CGCTTACAAA CAGCCGGATG
CTGCCGTCCT ATGGCTTTGT CGGTCTCACC AATTACACAA AGCTCTGGGC TCTGCCGCAT
TGGTGGCGGG CGATCACCAA TCTGGCGATT TTTGCATCGC TCTACATCAT CATCTGTTCG
GTCATCGGGC TTTTTCTGGC CATCCTGCTC GATCAGAAAA TCCGTGGCGA GGGCATCCTG
CGCCCGATCT ATCTCTATCC AATGGCGCTT TCCTTCATCG TGACCGGAAC CGCATGGAAA
TGGTTTCTCG ATCCCGGCAT CGGACTGGAA CACACCATGC ATCTATGGGG GTGGGAAAGC
TTTTCCTTCA ACTGGATCAA GAGCAACACG ATGGCGATCT ATTGTCTCGT GATTGCGGCG
GTCTGGCAGT CGTCCGGCTT CGTCATGGCC ATGTTTCTCG CGGGGCTTCG CGGCGTGGAC
AATGAAATCA TCAAGGCCGC GCAGATCGAC GGCGCTTCCA CCGGAACCAT TTATCGCCGT
ATCATCATTC CCCTGATGCG CCCGGTTTTC CTGTCTGCTT TCGTGGTGCT CGCGCATCTG
GCGATCAAGG CCTATGACCT TGTGATCGCG TTGACCGGCG GCGGGCCGGG GCAGGCGACG
GAACTGCCCG CAACCTTCAT GTATTCCTAT ACCTTCACCC GCAACCAGAT GGGTATCGGC
GCTTCCTCGG CGATCATCAT GCTGGCGATG ATCTTCTCGA TCATCATTCC CTATCTCTAT
TCGGAAATTC GCGGAGGGTC GCGGCCATGA
|
|---|
| Protein sequence | MPICPPHHPR RVSWDIELFR LKRNRRNRSN YLFCRIFQRK TVSHFWLENA LDKVAHMQRN
NRLQALVPKL VLGPSFLIVL VFVYGFIIYT GVLSLTNSRM LPSYGFVGLT NYTKLWALPH
WWRAITNLAI FASLYIIICS VIGLFLAILL DQKIRGEGIL RPIYLYPMAL SFIVTGTAWK
WFLDPGIGLE HTMHLWGWES FSFNWIKSNT MAIYCLVIAA VWQSSGFVMA MFLAGLRGVD
NEIIKAAQID GASTGTIYRR IIIPLMRPVF LSAFVVLAHL AIKAYDLVIA LTGGGPGQAT
ELPATFMYSY TFTRNQMGIG ASSAIIMLAM IFSIIIPYLY SEIRGGSRP
|
|---|
| |