Gene BMASAVP1_A0631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMASAVP1_A0631 
Symbol 
ID4679961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei SAVP1 
KingdomBacteria 
Replicon accessionNC_008785 
Strand
Start bp641638 
End bp642966 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content67% 
IMG OID639844905 
Productputative sorbitol/mannitol ABC transporter, periplasmic sorbitol/mannitol-binding protein 
Protein accessionYP_991977 
Protein GI121600704 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACGAA AGACGCTTAC CGCCGCCGCC GCACGCGTTG CCGCGTTCGC CGCGCTCGCC 
TCGTCGGCGC TCGCCGCGCA GGCGGCGACG CTGACGATCG CGACGCTCAA CAACCCGGAC
ATGATCGAGC TGAAGAAGCT GTCGTCCGCG TTCGAGAAGG CGAACCCGGA CATCCGGCTC
AACTGGGTGA TCCTCGAGGA GAACGTGCTG CGCCAGCGCG CGACGACCGA CATCACGACG
GGCAGCGGCC AGTTCGACGT GATGGCGATC GGCACGTACG AGGCGCCGCA GTGGGGCAAG
CGCGGCTGGC TCGCGCCGAT GTCGAACCTG CCCGCCGATT ACGATCTGAA CGACGTGATC
AAGACGGCGC GCGATTCGCT GTCGTACAAC GGCCAGTTGT ACGCGCTGCC GTTCTACGTC
GAAAGCTCGA TGACGTTCTA CCGCAAGGAC CTGTTCGCCG CGAAGGGCCT GAAGATGCCC
GAGCAGCCGA CTTACGAGCA GATCGCCGAA TTCGCCGACA AACTGACCGA CCGTGCGAAC
GGCACCTACG GGATCTGCCT GCGCGGCAAG GCGGGCTGGG GCGAGAACAT GGCGTACGTG
TCGACGGTCG TCAACACGTT CGGCGGCCGC TGGTTCGACG AGAACTGGAA CGCGCAGCTC
ACGTCGCCCG AGTGGAAGAA GGCGATCAAC TTCTACGTGA ACCTGCTCAA GAAGAACGGG
CCGCCGGGCG CGAGCTCGAA CGGCTTCAAC GAGAACCTGA CGCTCACCGC ATCGGGCAAG
TGCGCGATGT GGATCGACGC GACGGTCGCG GCGGGCATGC TGTACAACAA GCAGCAGTCG
CAGGTCGCGG AGAAGATCGG TTTCGCGGCC GCGCCGGTGG CCGCGACGCC GAAGGGCTCG
CACTGGCTGT GGGCGTGGGC GCTCGCGATT CCGAAGACGT CGAAGCAGCA GGATGCGGCG
AAGAAGTTCG TCACGTGGGC GACGTCGAAA CAGTACGTCG AGATGGTCGG CAAGGACGAG
GGCTGGGCGT CGGTGCCGCC GGGCACGCGC CAGTCCACCT ATCAGCGCGC CGAGTACAAG
GCCGCCGCGC CGTTCTCCGA GTTCGTGCTG AAGGCGATCC AGACCGCCGA TCCGACCGAT
CCGTCGCTGA AGAAGGTGCC GTACACGGGC GTGCAGTACG TCGGGATTCC TGAGTTCCAG
TCGTTCGGCA CGGTGGTCGG TCAGGCGATC GCGGGCGCGG TTGCCGGGCA GACGAGCGTC
GACCAGGCGC TCGCCGCGGG CCAGGCGGCG GCCGAGCGCG CGGTGCGCCA GGCCGGCTAC
CGCAAGTGA
 
Protein sequence
MQRKTLTAAA ARVAAFAALA SSALAAQAAT LTIATLNNPD MIELKKLSSA FEKANPDIRL 
NWVILEENVL RQRATTDITT GSGQFDVMAI GTYEAPQWGK RGWLAPMSNL PADYDLNDVI
KTARDSLSYN GQLYALPFYV ESSMTFYRKD LFAAKGLKMP EQPTYEQIAE FADKLTDRAN
GTYGICLRGK AGWGENMAYV STVVNTFGGR WFDENWNAQL TSPEWKKAIN FYVNLLKKNG
PPGASSNGFN ENLTLTASGK CAMWIDATVA AGMLYNKQQS QVAEKIGFAA APVAATPKGS
HWLWAWALAI PKTSKQQDAA KKFVTWATSK QYVEMVGKDE GWASVPPGTR QSTYQRAEYK
AAAPFSEFVL KAIQTADPTD PSLKKVPYTG VQYVGIPEFQ SFGTVVGQAI AGAVAGQTSV
DQALAAGQAA AERAVRQAGY RK