Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCZK1180 |
Symbol | potB |
ID | 3025956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus E33L |
Kingdom | Bacteria |
Replicon accession | NC_006274 |
Strand | + |
Start bp | 1280946 |
End bp | 1281794 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637545413 |
Product | spermidine/putrescine ABC transporter, permease |
Protein accession | YP_082779 |
Protein GI | 52144049 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00976508 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAG GGAAATTACT CGCACTACCT ACAGTCGCAT GGCTGTTAAT CTTCTTCCTA ATTCCCCTTC TGTTTGTATT GGCATTTGCC TTCATGCAGC GCGGGGCGTA TGGAACAGTG GAAATGCAAT TTACATTAGA AAACATAACA CGAGTATTTG ACCCATTATA TATGGGGACG TTATGGGAAA CAGTGAAAAT TGCGGTTATT ACTACAGTAA TATGTTTACT GATCGGTTAT CCATTTGCAT ATACAATTAC AATTGTTGAT CGCAAATATC GTTCCATTCT TTTATTATTG GCAACGATCC CGTTTTGGAT TAACTTCCTT GTTCGTTCAT ACGCATGGAT TGTTATTTTA CGTTCACAAG GTCTTGTGAA CACGTTTTTA TTAAAGCTGG GTATTATTAG TGAACCTTTA AATTTACTAT ATAATACACC TTCTGTAATA CTCGGGATGG TATATTCTTT ATTACCATTT ATGATTTTAC CAGTGTATGC AGCGATTGAG CAGCTTGATA AGCGTAAGCT AGAAGCAGCT TATGATTTAG GGGCAACACC AGTAAAAGCA TTTTGGAATG TTACAGTACC AATGACGATG TCAGGGATTG CTACCGGTTC TATTTTAGTG TTTGTTTCTT CTATCGGAAT GTTTGTTGTA TCAGACGTTA TGGGTGGATC GAAAGTAGCG TTAATCGGAA ACGTAATTCA AAATCAATTC TTAGGAGCGC GTGATTGGCC GTTTGGATCT GCGTTATCTA TGATTGTTGT TCTATTCTCT GTTCTGTTAA TTTACTTATA TTATCGTGCA ACGAAAGTAT ATAAATATGA TGGGAACGGA GGGGAATAG
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Protein sequence | MKKGKLLALP TVAWLLIFFL IPLLFVLAFA FMQRGAYGTV EMQFTLENIT RVFDPLYMGT LWETVKIAVI TTVICLLIGY PFAYTITIVD RKYRSILLLL ATIPFWINFL VRSYAWIVIL RSQGLVNTFL LKLGIISEPL NLLYNTPSVI LGMVYSLLPF MILPVYAAIE QLDKRKLEAA YDLGATPVKA FWNVTVPMTM SGIATGSILV FVSSIGMFVV SDVMGGSKVA LIGNVIQNQF LGARDWPFGS ALSMIVVLFS VLLIYLYYRA TKVYKYDGNG GE
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