Gene BBta_7860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_7860 
Symbol 
ID5151715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp8248604 
End bp8249578 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content62% 
IMG OID640562484 
Producthypothetical protein 
Protein accessionYP_001243591 
Protein GI148259006 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.266797 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCAC GTCGCCGCGC ATTAGGCCTG CTCGCTTCCG CCGTCCCATC CGTCGCTGCC 
GTACGCTTCG CATCGGCCGC GGAATATCCG GCCCGCCCGG TGCGGTTCGT GGTGGGTTAT
CCGCCGGGCG GGGCGACCGA TATCCTGGCG CGGCTGATCG GACAGCGCCT GTCCGAGACG
CTTGGTCAGC AATTCGTGGT CGAGAACAAG CCGGGGGCCG GCAACAATAT CGGAACCGAG
TCGGTGGTGA ATGCGGCCGC CGACGGCTAT ACGGTGCTGC TGGTCAACCC GGCGAACTAC
ATCAATGCCA GCCTCTACAC GAACCTGAAG TTCAACTTCG TGCGCGACAT CGCGCCGGTC
GCCTCGTTCA ATCGCGTGCC CAACGTGATG ACCGTCAACA ACGATATCAA GGCCAAGACC
GTCGCCGAAT TCATCGCCTA TCTCAAGGAA AACCCGGGCA AGGTGAACAT GGCGTCATCC
GGCAACGGCA CCTCGGTGCA TCTGTCCGGC GAGATGTTCA TGGCCATGAC CGGCACCAAG
ATGCAGCATG TGCCGTATCG TGGTGCGGCG CCGGCCATCA CCGACATGCT CGGCGGCCAG
GTCCAGGTCA TCTTCGACAA CATGCCGTCG ATCATCCAGC ATATCCGCTC AGGCTCGCTG
CGCGCCCTCG GCGTCACCAC CCAGGAGCGC TCGGCGCAAT TGCCCGACGT GCAGGCGATT
GCCGAAACCG TGCCGGGCTA CGAGGCGAGC GCCTTGTTTG GAATGGGCGC GCCGAAGAAT
ACGCCGAAAG AGATCATCGA GAAGCTGAAC AAGCAGGTGA ACGTCGTTCT CGCCGAGCCC
GAGATCAAGA AGAAGCTGGT CGATCTCGGC GGAGAGCCGT TGATCCAATC GCCCGATCAG
TTCGGGGCGC AGATCGTTGC CGAAACCGAC AAATGGAAAA AGGTCGTCGA GTTCGCCGGC
CTGAAGCTTG ACTGA
 
Protein sequence
MISRRRALGL LASAVPSVAA VRFASAAEYP ARPVRFVVGY PPGGATDILA RLIGQRLSET 
LGQQFVVENK PGAGNNIGTE SVVNAAADGY TVLLVNPANY INASLYTNLK FNFVRDIAPV
ASFNRVPNVM TVNNDIKAKT VAEFIAYLKE NPGKVNMASS GNGTSVHLSG EMFMAMTGTK
MQHVPYRGAA PAITDMLGGQ VQVIFDNMPS IIQHIRSGSL RALGVTTQER SAQLPDVQAI
AETVPGYEAS ALFGMGAPKN TPKEIIEKLN KQVNVVLAEP EIKKKLVDLG GEPLIQSPDQ
FGAQIVAETD KWKKVVEFAG LKLD