| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7848 |
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| Symbol | |
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| ID | 5151264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 8235914 |
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| End bp | 8237044 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640562472 |
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| Product | putative ABC transporter (permease protein) |
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| Protein accession | YP_001243579 |
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| Protein GI | 148258994 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0842] ABC-type multidrug transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00792305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.174905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCGCT CGCTGTCCAA TATCTTCTGG CTCGGCACCA AGGAGCTGCG CAGCCTGTTC
GGCGACGTCG TGCTGATCGG GCTCGTGATC TACTCGTTCA CGGTGGCGGT GATCAGCCAG
GCGCAGAGCA GCTCCCAGGA GCTGCACCGC GCCTCGATCG CCGTCGTCGA CGAGGACAAT
TCCGAGCTGT CGCGCCGCAT CGCAGCTGCA TTCCTGCCGC CTTATTTTCA GCGCCCCATC
TCCATCACCC AGCGCGAGGT CGAGCCGCTG ATGAACAGCG GCCGCTTCAC CTTCGTCCTC
GACATTCCGC CGAATTTCCA GCGCGACGTT CTCGCCGGGC GCAAGCCGTC GGTGCAGGTC
AATGTCGACG CCACCGCGAT GATCCAGGCC GGGATCGGCT CGGGCTATGC GCTCCAGATC
ATCACGACCG AGGTGGCCTG GTTCGTCGCC CGCTCGGAGG TCCCGGTGCA GGCGCCGGTC
AATCTGGTGA CGCGGATCGC CTTCAATCCC AACATCACCA CCGCCTGGTT CGAGGGCGTG
ATGGGCATCA TCAACAGCGT CACCATGCTG GCCATCATCC TGGCCGGCGC GGCGCTGGTG
CGCGAGCGCG AGCATGGCAC GATGGATCAT CTCCTGGTGA TGCCGCTCTC GCCCTTCGAG
ATCGCGATGT CGAAGATCTG GGCCAATGCG CTGGTCATCG CGGTCGCCGT TGCAGTGGCT
CTCTACGTCG TCGTGCGTTG GTATCTGCAG GTTCCGATCA ACGGGTCTGT TCCGCTCTTT
CTCTCCGGGA CAGTGCTCTA TCTGTTCTTC GCCACCGCCG TGGGTCTTTT TCTCGGCACC
ATCGCGCGAT CGATGCCGCA ACTCGGCCTG CTCTACATCC TGGTGGCGGT GCCGATGAAC
CTGTTGTCCG GTGCGATGAC GCCGGTCGAA AGCCAGCCGG TCTGGCTCGC CACGATCATG
CAGGCGTCGC CGTCGACCCA CTTCGTGTCC TTCGCGCAGT CGATCCTGTA TCGCGGCGCC
GGGCTCGATG TGGTCTGGCC GCAATTTCTG GCGGTGGCCG GCATCGGCGC GCTGGTCCTG
GCGCTCACCT TGCGCCGCTT CCGGGCGGCC ATCGCTGCGG CTGGCGCGTG A
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| Protein sequence | MVRSLSNIFW LGTKELRSLF GDVVLIGLVI YSFTVAVISQ AQSSSQELHR ASIAVVDEDN
SELSRRIAAA FLPPYFQRPI SITQREVEPL MNSGRFTFVL DIPPNFQRDV LAGRKPSVQV
NVDATAMIQA GIGSGYALQI ITTEVAWFVA RSEVPVQAPV NLVTRIAFNP NITTAWFEGV
MGIINSVTML AIILAGAALV REREHGTMDH LLVMPLSPFE IAMSKIWANA LVIAVAVAVA
LYVVVRWYLQ VPINGSVPLF LSGTVLYLFF ATAVGLFLGT IARSMPQLGL LYILVAVPMN
LLSGAMTPVE SQPVWLATIM QASPSTHFVS FAQSILYRGA GLDVVWPQFL AVAGIGALVL
ALTLRRFRAA IAAAGA
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