Gene BBta_6006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6006 
Symbol 
ID5154106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6224506 
End bp6225366 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content68% 
IMG OID640560727 
Producthypothetical protein 
Protein accessionYP_001241849 
Protein GI148257264 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00787853 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTGTTGT CACGAACCCT CTTGCTGAAG TCGGAACCCG CCGGGAACCT TGCCTCGCTT 
GACGAGCTTT TTGCGCTCGC GAATGCGATG GAGCGGGAGG CGGCTGATCG CTACACGGCG
TTGAGCGAAG AGATGCAGCG CCAGGGACGT CGCGATCTGG CCGAGGTCTT TGCCCGCTTG
GCTGCGGCCG AACGTGAGCA CGTCGACAGC GTGGCGCGGT GGTCGACGGC GCGCACGGGA
CACGCTCCCG ATGCCGCGCT GGTGCGATGG CGCGCGCCCG AGACGTTCGA GCCGGAGGCG
GCGAGCGAAA TTCACGGCTC GCGCCTGATG ACGCCGTATC GTGCGCTGGC CATGGCGGTG
CGCAATGAGG AGCGCGCCTT CGCGTTCTGG TCCTACGTCG CCGCGTTCAC TGACAATGCG
GACGTCAAGA CAGCGTCCGA GGCCATGGCG CGCGAGGAGC TTGGCCACGT CGCGACGCTG
CGCAAGGAGC GGCGGCGCGC TTATCACACG GAGAACGAAG GCGGGGGAAC GACATCCGAC
GGAGAGCCCG TCGATGCGCG TCAGCTGGAG GCGCGGCTTG CGGAGTTGCT CGAGGCCATG
GCCGCTCGCT CGGCGAGCCG CCCGGCCGAG CGTCTCCATG AGCTTGCGCA GGAGGCCTCC
AGAATGTCGG CGGAGATCGC CGGTCTGGTG CAATTGCCGG CCGCTCTCGT TCAGGCAGAG
TCGACGGTGA TCGCGGAGGC GCTGGTGGAC GCCTATCTGG ACCATGCCGA GCGCGCGACC
GATCCCGAGC AGCTCGATCG GTTGCAGCGA CTTGCGTCGC GGGCGATCGC GCGACTGGCG
TGGCTGCGAT CTCTCGGCTG A
 
Protein sequence
MLLSRTLLLK SEPAGNLASL DELFALANAM EREAADRYTA LSEEMQRQGR RDLAEVFARL 
AAAEREHVDS VARWSTARTG HAPDAALVRW RAPETFEPEA ASEIHGSRLM TPYRALAMAV
RNEERAFAFW SYVAAFTDNA DVKTASEAMA REELGHVATL RKERRRAYHT ENEGGGTTSD
GEPVDARQLE ARLAELLEAM AARSASRPAE RLHELAQEAS RMSAEIAGLV QLPAALVQAE
STVIAEALVD AYLDHAERAT DPEQLDRLQR LASRAIARLA WLRSLG