Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5998 |
Symbol | leuC |
ID | 5154237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6212673 |
End bp | 6214094 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640560721 |
Product | isopropylmalate isomerase large subunit |
Protein accession | YP_001241843 |
Protein GI | 148257258 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00498287 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGATGGATG TAGCGCGGCG GCAGCGAACG CTGTTCGACA AGGTCTGGGA TGCACATGTG GTGACGCGCC GCGAGGATGG CGCGGAGCTC TTGTTCATCG ATCGCCACCT CGTGCATGAG GGATCCTTCC ACGCCTTCAA CAAGCTGAAG GAGAGGCGCG CGCAGGTGCG CCGGCCTGAT CTCACGATCG GCGTCGCCGA TCACTACGTG CCGACGCGGA CCCGCGTGCT CAGCGAGATC GCGCCGGAGA TCGCGGGCAT GATCCGCCAG CTCGACGACA ATTGCCGCGC CAATGATATC CGTCTCTTCG GCTTCGACGA TCCGCGGCAG GGCATCGTCC ATGTGATCGG GCCCGAACAG GGCCTCACTC TGCCTGGTCT CACGATGGTC TGCGGCGACA GTCACACCTC GACGCATGGG GCGTTCGGCG CGCTCGCCTT CGGCATCGGC GCTTCGGAGG TTGCGCATGT GCTGCTGACG CAATGCCTGT GGCAGAAGAG ACCGAAGCAG ATGCGCATCA CGATCGACGG CGCCCTTGCA TCAGGGATCA CCGCCAAGGA TGTCGCGCTC GCGATCATCG CCAGGATCGG CGCCGATGGC GCCCGCGGCC ATGCCATCGA ATATGCCGGA ACCGCCATCG ATGCGCTGTC GATGGAGGGA CGGCTGACGC TGTGCAATCT CGCGATCGAG AGCGGCGCGC GTTGCGGGAT GATCGCGCCC GACGAGACAA CCTTCGCCTA TGTGACGGGG CGGCCGTTCG CGCCCAAGGG CGATCTCCTC GATCGCGCCA TCGCGAATTG GCGCGAGCTC GCGACCGACG CCGAGGCCGC GTTCGATCGC GAGATCCGCC TCAATGGCCA GGAGATCGCG CCGACGGTCA CCTGGGGCAT CAGTCCGGAG GACGCGCTGC CGATCAGCGC GGCCGTGCCT GATCCCGCTA TCTTCGACGA CCCCGCGCAA GCGAGCCATG TGCGCGAGGC GCTCGACTAT ATGGGGCTTC AGGCCGGCCA GGCGCTCGAC AGCATCAAGA TCGACCGCGT CTTCATCGGC TCCTGCACCA ACAGCCGCAT CGAGGATCTG CGGGCGGCCG CCGCCATCCT CGCCGGCCGC ACCGCCCGGG TGCCAGGGCT GGTGTCGCCG GGCTCGCACC TCGTCAAGCA GCAGGCCGAG CAGGAAGGCC TCGACCAGAT CTTCCGCGGC GCGGGCCTCG ACTGGGTCGG CTCCGGCTGC TCGATGTGCG TCGGCATGAA TGGCGACCTC GTGCCGGCCG GCGAGCGCTG CGCGTCGACC ACCAACCGCA ACTTCAAGGG CCGGCAAGGT CAAGGCGCGC GCACGCATCT GATGTCGCCG GCGATGGTGG CGGCCGCAGC CGTGACCGGC CAGCTGACCG ACGTGCGGAA CTTTCTGAGG GGCGATCGAT GA
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Protein sequence | MMDVARRQRT LFDKVWDAHV VTRREDGAEL LFIDRHLVHE GSFHAFNKLK ERRAQVRRPD LTIGVADHYV PTRTRVLSEI APEIAGMIRQ LDDNCRANDI RLFGFDDPRQ GIVHVIGPEQ GLTLPGLTMV CGDSHTSTHG AFGALAFGIG ASEVAHVLLT QCLWQKRPKQ MRITIDGALA SGITAKDVAL AIIARIGADG ARGHAIEYAG TAIDALSMEG RLTLCNLAIE SGARCGMIAP DETTFAYVTG RPFAPKGDLL DRAIANWREL ATDAEAAFDR EIRLNGQEIA PTVTWGISPE DALPISAAVP DPAIFDDPAQ ASHVREALDY MGLQAGQALD SIKIDRVFIG SCTNSRIEDL RAAAAILAGR TARVPGLVSP GSHLVKQQAE QEGLDQIFRG AGLDWVGSGC SMCVGMNGDL VPAGERCAST TNRNFKGRQG QGARTHLMSP AMVAAAAVTG QLTDVRNFLR GDR
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