Gene BBta_4960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4960 
Symbol 
ID5154969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5198565 
End bp5199053 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content60% 
IMG OID640559751 
Productputative insertion sequence transposase protein 
Protein accessionYP_001240880 
Protein GI148256295 
COG category[L] Replication, recombination and repair 
COG ID[COG3436] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00139484 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTCG TTCCTGCAGG CGTGAAAGTG CACCTGGCGC TCGGCTACAC CGACATGCGC 
AAAGGCATGG ATGGGCTCGC AATGCTGGTC CAGGACACGC TCAAGAAGGA TCCGTTCTCC
GGTCATCTGT TTGCCTTCCG CTGCAAGAGG GCATCGATAC TGAAGGTACT CTTCTGGGAC
GGAAACGGCC TTTGTCTGTT CACCAAACGC ATCGACCAGG GTGGCTTCGT ATGGCCGGTG
ATGGCGAGCT ATGACGGCTC GATCACACAC ACCTCAGCCC AACCGCCAGA GGATGGCGAG
CGAACACGCC GGCCAATTGA TGCGCCGCCG CTCGGCCATC GTCGAGCACC CGTTCGGTAC
ACTCAAGTGC CGCGCCGGCT ATCAGCACTT CCGCGGTTTC GACAAGGTTC GCGGAGAGTG
GAGCCTCACG GCGCTCTCCT ACAACTTCTC TCGCGCGGTC AACATTCTCG GCTTCGACGA
CTTCGTTAG
 
Protein sequence
MMFVPAGVKV HLALGYTDMR KGMDGLAMLV QDTLKKDPFS GHLFAFRCKR ASILKVLFWD 
GNGLCLFTKR IDQGGFVWPV MASYDGSITH TSAQPPEDGE RTRRPIDAPP LGHRRAPVRY
TQVPRRLSAL PRFRQGSRRV EPHGALLQLL SRGQHSRLRR LR