Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4629 |
Symbol | |
ID | 5150563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 4855579 |
End bp | 4856142 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640559431 |
Product | MerR family transcriptional regulator |
Protein accession | YP_001240563 |
Protein GI | 148255978 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00782953 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.030329 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACAAGG CGCCGGACGC GTTTCGGACC ATCAGCGAGG TCGCCCAGGA GCTCGACATC CCGCAGCACG TGCTGCGCTT CTGGGAAACC CGGTTCGCCC AGATCAAGCC GATGAAACGG AGCGGCGGCC GGCGCTATTA CCGGCCGGAC GACGTCGACC TGCTGAAGGG CATTCGCCGC CTGCTGTACG GCGAAGGCTA CACCATCAAG GGCGTACAGC GGATCCTCAA GGAGCACGGC GTCAAGTCGG TGCAAGGGCT TGCCGACAGC TCCGCGGCGG TCTCGTTCGG CGCGCTCGAG GAGACGCTCG GCCAGGCCCT CATGGAGGAA GAGCCGATCG AGGAGGCCGA GGTCACCTCG GAGGACGAGG AAGAGGAGGC CTCCGACGAA GAAGGCATCG ATTTCCGCTT CGTCGACACC GAGGACGACA TCCTCGACAC GTTCCGGGTC GGGCCGCCGC AGCGGGCCGG GATCAGGTCG GAGGACCGCG AAAAGCTCGA AGGCGTGCTC AAGGAACTGG TCGACTGCCG CGCGCTGCTC GACCGGGCGA TGAAGGACGT CTGA
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Protein sequence | MDKAPDAFRT ISEVAQELDI PQHVLRFWET RFAQIKPMKR SGGRRYYRPD DVDLLKGIRR LLYGEGYTIK GVQRILKEHG VKSVQGLADS SAAVSFGALE ETLGQALMEE EPIEEAEVTS EDEEEEASDE EGIDFRFVDT EDDILDTFRV GPPQRAGIRS EDREKLEGVL KELVDCRALL DRAMKDV
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