Gene BBta_4629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4629 
Symbol 
ID5150563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4855579 
End bp4856142 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content66% 
IMG OID640559431 
ProductMerR family transcriptional regulator 
Protein accessionYP_001240563 
Protein GI148255978 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00782953 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.030329 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACAAGG CGCCGGACGC GTTTCGGACC ATCAGCGAGG TCGCCCAGGA GCTCGACATC 
CCGCAGCACG TGCTGCGCTT CTGGGAAACC CGGTTCGCCC AGATCAAGCC GATGAAACGG
AGCGGCGGCC GGCGCTATTA CCGGCCGGAC GACGTCGACC TGCTGAAGGG CATTCGCCGC
CTGCTGTACG GCGAAGGCTA CACCATCAAG GGCGTACAGC GGATCCTCAA GGAGCACGGC
GTCAAGTCGG TGCAAGGGCT TGCCGACAGC TCCGCGGCGG TCTCGTTCGG CGCGCTCGAG
GAGACGCTCG GCCAGGCCCT CATGGAGGAA GAGCCGATCG AGGAGGCCGA GGTCACCTCG
GAGGACGAGG AAGAGGAGGC CTCCGACGAA GAAGGCATCG ATTTCCGCTT CGTCGACACC
GAGGACGACA TCCTCGACAC GTTCCGGGTC GGGCCGCCGC AGCGGGCCGG GATCAGGTCG
GAGGACCGCG AAAAGCTCGA AGGCGTGCTC AAGGAACTGG TCGACTGCCG CGCGCTGCTC
GACCGGGCGA TGAAGGACGT CTGA
 
Protein sequence
MDKAPDAFRT ISEVAQELDI PQHVLRFWET RFAQIKPMKR SGGRRYYRPD DVDLLKGIRR 
LLYGEGYTIK GVQRILKEHG VKSVQGLADS SAAVSFGALE ETLGQALMEE EPIEEAEVTS
EDEEEEASDE EGIDFRFVDT EDDILDTFRV GPPQRAGIRS EDREKLEGVL KELVDCRALL
DRAMKDV