| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_1808 |
|---|
| Symbol | |
|---|
| ID | 5155364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 1873530 |
|---|
| End bp | 1875293 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640556763 |
|---|
| Product | sulfate transporter |
|---|
| Protein accession | YP_001237920 |
|---|
| Protein GI | 148253335 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor
[TIGR00815] high affinity sulphate transporter 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCG CAAGCGAGCA TAATGCGCGG GGATCGGTCG GACGTCATCA GCCGACCTTC
GCGGAGCTGT ATTCACCGAA ACTTTTGACG GTCCTGCGCG AAGGCTATGG CCTGGCCGAT
CTGCGCGCCG ATGCGCTGGC GGGCTTGACG GTCGCGATCG TCGCTTTGCC GCTGTCGATG
GCCATCGCCA TCGCCTCCGG TGTTTCGCCC GGCCGTGGCC TCTACACGGC CGTCGTCGGC
GGCTTCCTGA TCTCGCTGCT CGGCGGCAGC CGCTTCCAGA TCGGCGGCCC GGCCGGCGCC
TTCATCGTGC TGGTCGCCGC GACCGTCGAC CGCCAGGGCC TCGACGGCCT GCTGGTCGCC
ACCATGATGT CCGGGGTGAT GCTGGTGATC GCCGGCTATT TGCGGCTCGG CACCTACATC
AAGTTCATTC CCTATCCGGT CACGGTCGGC TTCACCGCGG GCATCGCGGT CATCATCTTC
GCCAGCCAGC TGAAGGATCT GTTCGGCATC ACGCTGCCCG GCAAGGAGCC GGGCGAGCTG
ATCCCCAAGC TGGTCGCGCT CGCGCATGGC GCGCCGACCG CGAACATCCC GGCGGTTGCG
CTCGCCGTGA TGTCCATCGT CATCATCGTC TGGCTGAAGC AACTGCGGCC GACCTGGCCC
GGCATCCTCA TCGCGGTCGT CATTGCCGCC ATCATCACCT TTGCGCTGCA GCTGCCCGTG
GAGACCATCG GCACGCGCTT CGGCGGCATT CCGCGCGAGC TGCCGGCGCC GGCGCTGCCG
GCATTTTCGC TGGCCAAGGT CCAGGCGGTG TTTCCCGATG CGATCGCCTT CACGCTGCTC
GGGGCGATCG AGTCGCTGCT GTCGGCCGTC GTCGCCGACG GCATGACCGG CCGGCGCCAT
CGCTCCAATT GCGAGCTGGT GGCGCAGGGC TTCGCCAATA TCGGATCGGC GCTGTTCGGC
GGCATCTGCG TCACCGGCAC CATCGCGCGC ACCGCGACCA ATGTCCGCGC CGGCGCGCGT
GGGCCCGTTT CGGGCATGCT GCATTCGCTG TTCCTGCTGG TGTTCATGCT GATCGCCGCC
CCCTTGGCGA GCTACATCCC GCTGTCGGCG CTCGCCGCCG TGCTGGTCGT GGTGGCCTGG
AACATGGCCG AGAAGCACGA ATTCCTGACC CTGATCCGCT CGTCCTGGGG CGATGCCACG
GTGCTGCTCG CCACCTTCGG GCTGACGATC TTTCGCGACC TCACCGAAGG CATCCTGGTC
GGCTTCGCGC TCGGCGCCGT GCTGTTCATC AACCGCATGG CGCAGATGAC CGGGGTCGAG
GACGGCACGC CGCTGGTCGC GCAGGACCGC GCCGATTTCG AGGATGGCGC GCGTGTGCCG
TATGATGCCA AGCTCAGCGC CGACAAGGAT GTGCTGGTCT ATCGCATCAC CGGCGCGTTC
TTCTTCGGCG CCGCCTCGAC GGTCGGCACC GTGCTCGATT CCATCGCCGA CCGGCGCAAG
GCCTTCGTGG TCGATTTCGC CGCGGTGCCG TTCCTCGATT CGACGGCGGC CAATGCCATG
AGCCGCGTCG CCGCCAAAGC CAAGCGCCAG GGCATCCGGC TGTTCATCAC CGGGGCCTCG
CCGACGGTGC GCCGGGCCTT GCTGACCCAC GGCGTGCGGC CGCCGCTGGT GCGCTACCGC
GAGACCATCG AGCGCGCCGT GGCCGACATC AAGGGCCGGG AGACGGCGGG CGAGGAGATC
GCCGACGGGC TGGCGGCGAG CTGA
|
|---|
| Protein sequence | MSIASEHNAR GSVGRHQPTF AELYSPKLLT VLREGYGLAD LRADALAGLT VAIVALPLSM
AIAIASGVSP GRGLYTAVVG GFLISLLGGS RFQIGGPAGA FIVLVAATVD RQGLDGLLVA
TMMSGVMLVI AGYLRLGTYI KFIPYPVTVG FTAGIAVIIF ASQLKDLFGI TLPGKEPGEL
IPKLVALAHG APTANIPAVA LAVMSIVIIV WLKQLRPTWP GILIAVVIAA IITFALQLPV
ETIGTRFGGI PRELPAPALP AFSLAKVQAV FPDAIAFTLL GAIESLLSAV VADGMTGRRH
RSNCELVAQG FANIGSALFG GICVTGTIAR TATNVRAGAR GPVSGMLHSL FLLVFMLIAA
PLASYIPLSA LAAVLVVVAW NMAEKHEFLT LIRSSWGDAT VLLATFGLTI FRDLTEGILV
GFALGAVLFI NRMAQMTGVE DGTPLVAQDR ADFEDGARVP YDAKLSADKD VLVYRITGAF
FFGAASTVGT VLDSIADRRK AFVVDFAAVP FLDSTAANAM SRVAAKAKRQ GIRLFITGAS
PTVRRALLTH GVRPPLVRYR ETIERAVADI KGRETAGEEI ADGLAAS
|
|---|
| |