Gene BBta_1190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_1190 
Symbol 
ID5155664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp1262689 
End bp1263303 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content60% 
IMG OID640556173 
Producthypothetical protein 
Protein accessionYP_001237340 
Protein GI148252755 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.995327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTCGATA GCGAGAAAAT CGCCCTCAGC GTTTTGGCCC GTGCAGCAGC CGACGAAGGA 
ATATCCATCG ACCTGGAAGA GGCCAAAAGG CTCTTTCGCG GGTTGAAGTT CGCCGATTGC
GTGCGAGAAA TCGAACGGCG ATTGGGGCAC CGCGTCGGCG AGGATTTCGA GGCTGGCGTG
AGGCGAGCAA CTGCACTGGC ATTTGAAGCC GAACTGCAAC CCGTCGAGGG GATACATGCG
GCGCTTGCGG AGATCACTCT TCCGTTCTGC GTCGCATCGA ACGGGCCGAT GTCGAAGATC
AGGCACGCAC TCGGACTGAC AAAATTGCTG AACTATTTCG AAGGCCGCAT CTTCAGCGCC
TACGACGTCG GCTCGTGGAA GCCTGACCCT GATCTTTTCC TGCACGCTGC GCAGACCTTC
GGGATCGCCC CCGGGCGCTG CGTCGTGATC GAGGACTCGT TGTCAGGCGT CACTGCGGCG
CATGCTGCGG GCATGCAGGT CATCGGATTC AGCGGCGGTG ATCCGGACGT CGAACTGCAA
TTGGCGCCCG TCCGTGCAAA TCTTTTGCAG CAAATGCGGG ACCTTCCGAA GCTGCTCAAG
ATGGGCGGGC GCTGA
 
Protein sequence
MVDSEKIALS VLARAAADEG ISIDLEEAKR LFRGLKFADC VREIERRLGH RVGEDFEAGV 
RRATALAFEA ELQPVEGIHA ALAEITLPFC VASNGPMSKI RHALGLTKLL NYFEGRIFSA
YDVGSWKPDP DLFLHAAQTF GIAPGRCVVI EDSLSGVTAA HAAGMQVIGF SGGDPDVELQ
LAPVRANLLQ QMRDLPKLLK MGGR