| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0212 |
|---|
| Symbol | pheT |
|---|
| ID | 5150890 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 219012 |
|---|
| End bp | 221420 |
|---|
| Gene Length | 2409 bp |
|---|
| Protein Length | 802 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640555237 |
|---|
| Product | phenylalanyl-tRNA synthetase subunit beta |
|---|
| Protein accession | YP_001236415 |
|---|
| Protein GI | 148251830 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
|---|
| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA CGCTGTCCTG GCTGAAGGAC CATCTCGATA CCGACGAGTC GGTCGAGACG
CTCGCCAACA AGCTCACGAT GATCGGCCTC GAGGTCGAGC ATCTCGAGGA CAAGGCCAAG
CTGCTCGCGC CGTATAAAAT CGCGCGCGTC GTCTCCGCCG AGCAGCATCC GAACGCGGAC
CGCTTACGCG TCTGCATGGT CGACACCGGC GACGGTGGCG CGCCGGTGCA GGTGGTCTGC
GGTGCGCCGA ATGCGCGCGC GGGTCTGATC TCGGTGTTCT CGCCGCCCGG CACCTACATC
CCCGGCAAGA ACATCACGCT GTCGGTCGGC ACGATCCGTG GCGTCGAGAG CCGCGGCATG
CTGTGCTCGG CCGCCGAGCT GCAGATCTCC GACGATCACG ACGGCATCAT GGAGCTGCCC
GCCGATGCGC CGATCGGCAA GCCCTATGCC GAATGGGCCG GGCTGGGCGA TCCCCAGTTC
GAGATCAATT TGACGCCGAA CCGCCAGGAC TGCACCGGCG TCCACGGCAT CGCGCGCGAC
CTTGCAGCCG CCGACATGGG CAAGCTCAAC GATCCCGCCA TCAAGCCGAT CAAGGGCGAG
TTCCCCTGCC CTGTGAAGGT TGCTGTCGAG GACGAGAGAC TGTGTCCCGG CTTCGCGCTG
CGGCTGGTGC GCGGCGTCAA GAACGGCCCG TCGCCGGCAT GGCTGCAGCA GCGCCTGACC
TCGATCGGCC TGCGCCCGAT CAACGCGCTG GTCGACATCA CCAACTACAT GACGTTCGAC
CGCGCGCGGC CGTTGCACGT GTTCGACGCC AAGAAGGTGA AGGGCAACCT CGTCGTCCGC
CGTGCCCGCG ACGGCGAGAC CCTGCTGGCG CTCGACGGCC GCACCTACAC GCTCGACAGT
TCGATGTGTG TCATCGCCGA TGACGCCGGC GTCGAATCGC TGGCCGGCAT CATGGGCGGT
GAGGCCTCGG GCTGCGACGA GACCACCACC GACGTGCTGA TCGAATCGGC GCTGTGGAAC
GAGATCAACA TCGCCCAGAC CGGCCGCAAG CTCGGCATCA ATTCCGACGC GCGCTACCGT
TTCGAACGGG GTGTCGATCC GGCCTTCATG GTCCCTGGCC TGGAATTGGC GACGAAGCTG
GTGCTCGAGC TGTGCGGCGG CACCCCGTCG GAGAACGTCG TCCTGGGCAA CCGCTTCGGC
GACGATCGCA TCATCGACTT CCCGCTGACC GAGGTGAAGC GTCTCGCGGG CATCGAGGTG
TCGCTGACCG AGATGCGCCG GATCCTGACC CATCTCGGCT TCGTGGTCGC GGGTGCTGGC
CCCGTCGTGA AGGTCGCTGT CCCCTCCTGG CGCAGCGACG TGCACGGCAA GGCCGACATC
GTCGAGGAAA TCGTGCGCAT GGTCGGCGTC GACAAGGTGC CGATGACCCC GTTCGAGCGC
GGCGACGCGC CGCGCAAGCC GGTACTGACG CCGCTGCAGC TGCGCACTCG CCGCGCCAAG
CGCGCGTTGG CGGCGCGCGG CATGGTCGAG GCCGTGACCT GGTCGTTCAT CTCCAAGCCG
GCGGCCGAAT TGTTCGGCGG CGGCAAGGCG GAGCTTGCGC TCGCCAATCC GATTGCGGCG
GATCTCTCCG ACATGCGGCC GAGCCTGCTG CCGGGCCTGA TCGCGACCGT GCAGGCCAAT
GCCGATCGCG GCTTCGGCGA TGCCGCGATC TTCGAGGTCG GACAGGTGTT CAAGGGCGAT
CGGCCGGAGG ATCAGTTCGT CGCCGCGAGC GGCATCCGCC GCGGCATCGC GTCGTCGAAC
GGTCTCGGCC GGCATTGGAC CGGATCGCAG GCGGCGAACG CGTATGACGC GAAGGCCGAC
GCGCTCGCCG TGCTGGCGGC GGCCGGCGCG CCGATGGCGT CGCTGCAGAT CGTCGCCGGC
GGTCCGGCCT GGATGCATCC GGGCCGCTCC GGCACGATCC AGATGGGCCC GCAGAACGTG
CTCGGCCATT TCGGCGAGCT GCATCCGCGC GCGCTGGAGG CCTTGAAGGC GGACGGACCT
CTCGTCGCCT TCGAGGTCAT CCTCGACCGC ATTCCGGCCG CCAAGGCCAA ACCGACCCGG
GCCAAGCCGG TGCTGGAGCT GTCGGCGTTC CAGCCGGTGT CGCGTGACTT CGCCTTCATC
GTCGATCGCA AGGTCAAGGC CGGTGACATC GTCCGCGCGG CACAGGGCGT CGACAAAAAG
CTGATCACGG ACGTCACGGT GTTCGACGTC TATGAGGGCA AGGGCATCGA GGACGGCAAG
AAGTCGATCG CGATCGCCGT GACCCTGCAA CCGCGCGACA AGACCATGAC CGACGAGGAG
ATCGACGCGG TCGCGGCGAA GATCACTGCA GACGTCGGCA AGAAGACCGG CGGCACATTG
CGCGGATGA
|
|---|
| Protein sequence | MKFTLSWLKD HLDTDESVET LANKLTMIGL EVEHLEDKAK LLAPYKIARV VSAEQHPNAD
RLRVCMVDTG DGGAPVQVVC GAPNARAGLI SVFSPPGTYI PGKNITLSVG TIRGVESRGM
LCSAAELQIS DDHDGIMELP ADAPIGKPYA EWAGLGDPQF EINLTPNRQD CTGVHGIARD
LAAADMGKLN DPAIKPIKGE FPCPVKVAVE DERLCPGFAL RLVRGVKNGP SPAWLQQRLT
SIGLRPINAL VDITNYMTFD RARPLHVFDA KKVKGNLVVR RARDGETLLA LDGRTYTLDS
SMCVIADDAG VESLAGIMGG EASGCDETTT DVLIESALWN EINIAQTGRK LGINSDARYR
FERGVDPAFM VPGLELATKL VLELCGGTPS ENVVLGNRFG DDRIIDFPLT EVKRLAGIEV
SLTEMRRILT HLGFVVAGAG PVVKVAVPSW RSDVHGKADI VEEIVRMVGV DKVPMTPFER
GDAPRKPVLT PLQLRTRRAK RALAARGMVE AVTWSFISKP AAELFGGGKA ELALANPIAA
DLSDMRPSLL PGLIATVQAN ADRGFGDAAI FEVGQVFKGD RPEDQFVAAS GIRRGIASSN
GLGRHWTGSQ AANAYDAKAD ALAVLAAAGA PMASLQIVAG GPAWMHPGRS GTIQMGPQNV
LGHFGELHPR ALEALKADGP LVAFEVILDR IPAAKAKPTR AKPVLELSAF QPVSRDFAFI
VDRKVKAGDI VRAAQGVDKK LITDVTVFDV YEGKGIEDGK KSIAIAVTLQ PRDKTMTDEE
IDAVAAKITA DVGKKTGGTL RG
|
|---|
| |