| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_0092 |
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| Symbol | ligC |
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| ID | 5155453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 99021 |
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| End bp | 100034 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640555120 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001236299 |
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| Protein GI | 148251714 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.70122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGCGC GGTCGGTGGA TGCGATCCCG CGCGGGCACG AGTGGCAGTA TGAGCCGAAA
TGGGACGGCT TCCGCTGTCT TCTGGCGCGC CACGGGGCTG ACGTGACGAT GCAGTCCAAG
GCGGGCGAAG ATCTCGCACG CTACTTTCCC GAGGTGGCCG CCGCCGCGCG GGCACTGAAG
GCCACGCGCT TCACGCTTGA TGGCGAGCTG GTCGTGCCGC AGGCGAAGTC GTTCTCGTTC
GACGCGTTGC TGCAGCGGAT CCATCCGGCC GCGAGCCGCG TGAAGAAGCT ATCGGTGGAG
ACGCCGGCGC TGTTCCTCGC CTTCGACTTG CTGGCGACGG CGAAGGATGC AGAGCTGATG
GCCCGGCCGC TGCACGCAAG GCGGCTCGCG CTGGAGGCGT TCGCGAAGGC GAATTTCACG
GATCATCCGA CCTTCCGGCT GTCGCCGGCC ACCACCCGCT TTGCGACCGC GCAGGACTGG
TTGGCGCAGT CGGGCGGCGG CTCGGACGGC GTGATCGCCA AGCGCATCGA CCTGCCCTAC
CAGGCCGGCA ATCGCGACGG CATGCAGAAG ATCAAGCGCC ATCGCTCGGC CGATTGCGTC
ATCGGCGGCT TCCGCTACGC CACCAACAAG GGCGCCCAGG GCCGCAAGCT GGTCGGCTCG
CTGCTGCTCG GGCTCTACGA TGATGACGGC CTGCTGCATC ACGTCGGCTT CACCTCCGCG
CTCAAGAAGG AGGAGAAGCC CGCATTGACA GACAAATTAG AACCGCTGAT TGCGCCGCCC
GGCTTCACCG GCAATGCGCC GGGCGGGCCG AGCCGCTGGT CGACCGCGCG CTCGACAGAA
TGGTGCCCGC TCAAGCCGAA GCTGGTGATC GAGGTCTGCT ACGACCATTT CTCCGGCGAT
CGCTTCCGCC ACGGCACCTC GATCCTGCGC TGGCGTCCCG ACAAATCGCC AAGGCAATGT
ACGTTCGAGC AGCTCAAGCA GACGATCGCC GATCCCTTGA AGCTGCTCGC GTGA
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| Protein sequence | MEARSVDAIP RGHEWQYEPK WDGFRCLLAR HGADVTMQSK AGEDLARYFP EVAAAARALK
ATRFTLDGEL VVPQAKSFSF DALLQRIHPA ASRVKKLSVE TPALFLAFDL LATAKDAELM
ARPLHARRLA LEAFAKANFT DHPTFRLSPA TTRFATAQDW LAQSGGGSDG VIAKRIDLPY
QAGNRDGMQK IKRHRSADCV IGGFRYATNK GAQGRKLVGS LLLGLYDDDG LLHHVGFTSA
LKKEEKPALT DKLEPLIAPP GFTGNAPGGP SRWSTARSTE WCPLKPKLVI EVCYDHFSGD
RFRHGTSILR WRPDKSPRQC TFEQLKQTIA DPLKLLA
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