Gene BBta_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0080 
SymbolmutM 
ID5148851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp80573 
End bp81454 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content67% 
IMG OID640555108 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionYP_001236287 
Protein GI148251702 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.364288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGAGC TGCCCGAAGT CGAGACCGTC CGGCGCGGGC TGCAGCCGGT CATGGAGGGG 
GCCAAGATCG TCGCCGCCGA GGCGCGGCGC GGCGATCTGA GGTTTCCGTT CCAGCCCGAT
TTTGCGAAGC GCCTGCAGGG CCAGACCGTC AGGGGGCTGG GCCGCCGCGC CAAATATTTG
CTGGCGGACC TCAGCTCAGG CGACGTGCTG CTGATGCATC TCGGCATGTC CGGATCGTTC
CGGGTCATCA AGCAGGACGA CGAGGAGACG CCGGGCGAGT TTCATTATCC GCGCGGCAAG
GACAGCGTGC ATGACCACGT CGTGTTTCAC ATGTCCTCGG GGGCCGACAT CGTGTTCAAC
GATCCGCGCC GGTTCGGCTT CATGAAGATC ATCGGCCGCG GCGAGATCGA GCGCGAGCCG
CATCTGAAGG ATCTCGGGCC GGAGCCGCTC GGAAATGAAT TCGACGCCGC GATGCTGGCA
ACGGCTTGCG CCGGCAAGAA GACGAGCCTG AAGGCGGCGC TGCTCGACCA GCGCGTCGTC
GCCGGGCTCG GCAACATCTA TGTCTGCGAG GCGCTGTTCC GCGCGCATCT GTCGCCGCGG
CGGCTGGCGG CGACGCTCGC CACCAGGAAG GGCGAGCCGA CCGATCACGC CAGGCGGCTG
GTCGAGGCGA TCCACGCCGT GCTCAACGAG GCGATCCGCG CCGGCGGCTC ATCGCTGCGT
GATCACCGGC AGACGAGCGG CGAGCTCGGC TATTTCCAGC ACTCGTTCCA GGTCTATGAC
CGCGAGGGCG AACCGTGCCG GACCGACGGC TGCGGCGGCG TGGTGAAGCG CTTCGTGCAG
AACGGCCGCT CGACCTTCTG GTGTCCGAAG TGCCAGCGAT GA
 
Protein sequence
MPELPEVETV RRGLQPVMEG AKIVAAEARR GDLRFPFQPD FAKRLQGQTV RGLGRRAKYL 
LADLSSGDVL LMHLGMSGSF RVIKQDDEET PGEFHYPRGK DSVHDHVVFH MSSGADIVFN
DPRRFGFMKI IGRGEIEREP HLKDLGPEPL GNEFDAAMLA TACAGKKTSL KAALLDQRVV
AGLGNIYVCE ALFRAHLSPR RLAATLATRK GEPTDHARRL VEAIHAVLNE AIRAGGSSLR
DHRQTSGELG YFQHSFQVYD REGEPCRTDG CGGVVKRFVQ NGRSTFWCPK CQR