Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0080 |
Symbol | mutM |
ID | 5148851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 80573 |
End bp | 81454 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640555108 |
Product | formamidopyrimidine-DNA glycosylase |
Protein accession | YP_001236287 |
Protein GI | 148251702 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.364288 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAGC TGCCCGAAGT CGAGACCGTC CGGCGCGGGC TGCAGCCGGT CATGGAGGGG GCCAAGATCG TCGCCGCCGA GGCGCGGCGC GGCGATCTGA GGTTTCCGTT CCAGCCCGAT TTTGCGAAGC GCCTGCAGGG CCAGACCGTC AGGGGGCTGG GCCGCCGCGC CAAATATTTG CTGGCGGACC TCAGCTCAGG CGACGTGCTG CTGATGCATC TCGGCATGTC CGGATCGTTC CGGGTCATCA AGCAGGACGA CGAGGAGACG CCGGGCGAGT TTCATTATCC GCGCGGCAAG GACAGCGTGC ATGACCACGT CGTGTTTCAC ATGTCCTCGG GGGCCGACAT CGTGTTCAAC GATCCGCGCC GGTTCGGCTT CATGAAGATC ATCGGCCGCG GCGAGATCGA GCGCGAGCCG CATCTGAAGG ATCTCGGGCC GGAGCCGCTC GGAAATGAAT TCGACGCCGC GATGCTGGCA ACGGCTTGCG CCGGCAAGAA GACGAGCCTG AAGGCGGCGC TGCTCGACCA GCGCGTCGTC GCCGGGCTCG GCAACATCTA TGTCTGCGAG GCGCTGTTCC GCGCGCATCT GTCGCCGCGG CGGCTGGCGG CGACGCTCGC CACCAGGAAG GGCGAGCCGA CCGATCACGC CAGGCGGCTG GTCGAGGCGA TCCACGCCGT GCTCAACGAG GCGATCCGCG CCGGCGGCTC ATCGCTGCGT GATCACCGGC AGACGAGCGG CGAGCTCGGC TATTTCCAGC ACTCGTTCCA GGTCTATGAC CGCGAGGGCG AACCGTGCCG GACCGACGGC TGCGGCGGCG TGGTGAAGCG CTTCGTGCAG AACGGCCGCT CGACCTTCTG GTGTCCGAAG TGCCAGCGAT GA
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Protein sequence | MPELPEVETV RRGLQPVMEG AKIVAAEARR GDLRFPFQPD FAKRLQGQTV RGLGRRAKYL LADLSSGDVL LMHLGMSGSF RVIKQDDEET PGEFHYPRGK DSVHDHVVFH MSSGADIVFN DPRRFGFMKI IGRGEIEREP HLKDLGPEPL GNEFDAAMLA TACAGKKTSL KAALLDQRVV AGLGNIYVCE ALFRAHLSPR RLAATLATRK GEPTDHARRL VEAIHAVLNE AIRAGGSSLR DHRQTSGELG YFQHSFQVYD REGEPCRTDG CGGVVKRFVQ NGRSTFWCPK CQR
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