Gene BBta_0057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0057 
SymbolinfB 
ID5153078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp58710 
End bp61475 
Gene Length2766 bp 
Protein Length921 aa 
Translation table11 
GC content69% 
IMG OID640555087 
Producttranslation initiation factor IF-2 
Protein accessionYP_001236266 
Protein GI148251681 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0532] Translation initiation factor 2 (IF-2; GTPase) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00487] translation initiation factor IF-2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACA ACAACACTCC GGGCGACAAG AAACTGAGTG TCCCGACCAA GACCTTGACG 
CTGAAGCCGC GCGTCGAGAC TGGCACGGTA CGCCAGAGCT TCCCACATGG CCGGAGCAAG
CAGGTAGTGG TCGAGAAGCG CGGCACCAAG CGCCGCGTCG GCGATGGGGC GCCCGATGCG
CCGCATGCGC CGGAGCCGGT CGTCGCCAAG GCGCCGCCGC CGCCACCGCC AAGCAACCGT
CCGTCAGGGC CCCGTCCCGG CTCTTCGCAG CGCGGCGGAT CCGGCGTGGT GCTGCGCACC
CTGACCGAGG ATGAGCGTTC GGCCCGCGCC AGCGCGCTCG CCGACGCGCG CGTCCGCGAC
ATGGAAGAGC GCCGTCAGGC CGAAGAGGAA GCCCGCCGCC GCGCCGAGCG CGAAGCCGCC
GAACGCGCCG AGCGCGAGGC TGCCGAGGCG CGCCGCAAGG CCGAGGAAGA GCGCCACCGT
CAGGAAGAGG AAGCCAAGCG CAAGGCCGAG CTCGAGGCCA AGAAGCGGTT CGGTGAAGGC
GAGGCGCCCC GTCCGGCGAC CGCCGCGCCG CAGCAGCAGC CCGCCGCGGT CACAGCTCCC
GCTCGTCCGG CGCAAGCCCC AGGTCGCCCG CAGGGCGCAC CGGGCAGCCG GCCACAGCAG
ATCGGCACCA GCGCGCGCCC CGGCGGGGCA CAGCCCGCCG GCGCACGCCC TGCAGCCGCC
CGTCCCGCGG GCGCAGGTCC GCTCGGCCGC GCGCCCGGCG TTGCCGCAGG TCCCGAGGAT
GATGAGGGTC CGCGCCAGAT CCGCCGTGGT CCCGGCGGCG CTGCGCGTCC TGCGCCGCCG
CCGAAGACCA CGCACAAGCC GGGTCCGCAG AAGCAGCGCG GCCGCCTGAC CGTCGTCACC
GCGCTCACCG CCGACGACGT GCGCGAGCGC TCGATCGCCT CGTTCCGCCG CCGCACCCAG
CGCCTCAAGG GCCATGCGGC CAATGAGCAG AAGGAGAAGC TGGTCCGCGA GGTGACGATT
CCGGAAGCGA TCACCATTCA GGAACTCGCC AACCGCATGT CGGAGCGCGC GGTCGACGTC
ATCCGTCTGC TGATGCGCCA GGGCGCGATG CACAAGATCA CCGACGTGAT CGACGCCGAC
ACCGCACAGC TGATCGCCGA GGAACTCGGC CACAGCGTGA AGCGCGTCGC CGCCTCGGAC
GTGGAAGAGG GCCTGTTCGA CGTCGTCGAC GATTCGACCG ACACCGAGCC GCGCTCGCCG
GTCGTGACCG TGATGGGCCA TGTCGACCAC GGCAAGACCT CGCTGCTCGA CGCGCTGCGC
CATGCCAACG TGGTGTCCGG CGAAGCCGGC GGCATCACCC AGCACATCGG CGCCTATCAG
GTGACGGCGC CGGATTCCGG CAAGAAGATC ACCTTCATCG ACACGCCGGG CCACGCCGCG
TTCACCGCGA TGCGCGCCCG CGGCGCCAAG GTCACCGACA TCGTCGTGCT GGTGGTCGCG
GCCGATGACG GCGTCATGCC GCAGACGATC GAGGCCATCA ACCACGCCAA GGCGGCGAAG
GTGCCGATGA TCGTGGCGAT CAACAAGATC GACAAGCCGG ATGCACGGCC CGATCGCGTC
CGCACCGAGC TGCTGCAGCA CGAGGTGCAG GTCGAGTCCC TGGGTGGCGA AGTCGTCGAC
GTCGAGGTCT CGGCCAAGAA CAAGACCAAC CTCGATCGTC TGCTCGAGAT GATCGCGCTG
CAGGCCGACA TCCTCGACCT CAAGACCAAT TCGGATCGTC CGGCCGAGGG CACCGTGATC
GAAGCCAAGC TCGATCGCGG CCGCGGTCCG GTCGCCACCG TGCTGGTCCA GCGCGGCACG
TTGCGGGTCG GCGACATCAT CGTCGCCGGC GCGGAGATGG GCCGCGTCCG CGCGCTGATC
TCGGATCAGG GCGAGACGTT GCAGGAGGCA GGTCCGTCGG TGCCGGTCGA GGTGCTCGGC
TTCAACGGTC CGCCGGAAGC CGGCGACCGT CTTGCCGTGG TCGAGAACGA AGCCCGTGCC
CGTCAGGTCA CCAGCTATCG CGCACACCAG AAGCGCGAGA ACGCGGCAGC CTCGATCTCC
GGCATGCGCG GTTCGCTCGA GCAGATGATG TCGCAATTGA AGACCGCGGG CCGCAAGGAA
TTCCCGCTGG TCATCAAGGC CGACGTGCAG GGCTCGCTGG AAGCCATTCT CGGCTCGCTG
GAGAAGCTCG GCACCGACGA GGTCGCCGCG CGCATCCTGC ATGCCGGCGT CGGCGGCATC
AGCGAGTCGG ACGTGACGCT CGCGGAAGGC TTCAACGCCG CGATCATCGG CTTCTCGGTG
CGAGCCAACA AGGAAGCGGC CGCACTCGCC AAGCGCAACG GCATCGAGAT CCGCTACTAC
AACATCATCT ACGACCTCGT GGATGACGTG AAGAAGGCGA TGAGCGGCCT GCTTGCGCCG
ACGCTGCGCG AAACCATGCT CGGCAATGCG CAGATCCTGG AGGTGTTCAA CATCTCCAAG
GTCGGCAAGG TCGCCGGCTG CCGCGTCACC GATGGCACTG TCGAGCGCGG CGCCAATGTC
CGCCTGATCC GCGACAACGT CGTGGTTCAC GAGGGCAAGC TGTCGACCTT GAAGCGCTTC
AAGGACGAAG TGAAGGAAGT GCAGGCCGGC CAGGAATGCG GCATGGCCTT CGAGAGCTAC
GGCGACATGC GTGTCGGCGA CGTCATCGAG TGTTATCGCG TGGAGACCAT CCAGCGCTCG
CTGTAA
 
Protein sequence
MADNNTPGDK KLSVPTKTLT LKPRVETGTV RQSFPHGRSK QVVVEKRGTK RRVGDGAPDA 
PHAPEPVVAK APPPPPPSNR PSGPRPGSSQ RGGSGVVLRT LTEDERSARA SALADARVRD
MEERRQAEEE ARRRAEREAA ERAEREAAEA RRKAEEERHR QEEEAKRKAE LEAKKRFGEG
EAPRPATAAP QQQPAAVTAP ARPAQAPGRP QGAPGSRPQQ IGTSARPGGA QPAGARPAAA
RPAGAGPLGR APGVAAGPED DEGPRQIRRG PGGAARPAPP PKTTHKPGPQ KQRGRLTVVT
ALTADDVRER SIASFRRRTQ RLKGHAANEQ KEKLVREVTI PEAITIQELA NRMSERAVDV
IRLLMRQGAM HKITDVIDAD TAQLIAEELG HSVKRVAASD VEEGLFDVVD DSTDTEPRSP
VVTVMGHVDH GKTSLLDALR HANVVSGEAG GITQHIGAYQ VTAPDSGKKI TFIDTPGHAA
FTAMRARGAK VTDIVVLVVA ADDGVMPQTI EAINHAKAAK VPMIVAINKI DKPDARPDRV
RTELLQHEVQ VESLGGEVVD VEVSAKNKTN LDRLLEMIAL QADILDLKTN SDRPAEGTVI
EAKLDRGRGP VATVLVQRGT LRVGDIIVAG AEMGRVRALI SDQGETLQEA GPSVPVEVLG
FNGPPEAGDR LAVVENEARA RQVTSYRAHQ KRENAAASIS GMRGSLEQMM SQLKTAGRKE
FPLVIKADVQ GSLEAILGSL EKLGTDEVAA RILHAGVGGI SESDVTLAEG FNAAIIGFSV
RANKEAAALA KRNGIEIRYY NIIYDLVDDV KKAMSGLLAP TLRETMLGNA QILEVFNISK
VGKVAGCRVT DGTVERGANV RLIRDNVVVH EGKLSTLKRF KDEVKEVQAG QECGMAFESY
GDMRVGDVIE CYRVETIQRS L