Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_0049 |
Symbol | |
ID | 5153440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 49069 |
End bp | 50229 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640555079 |
Product | transporter |
Protein accession | YP_001236258 |
Protein GI | 148251673 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGATT CCGAGCCCAT TCACGACAAT CCGCGCCAGA CGCGCAACCT GCCGGCCGTG GTCCCGCCGG CCGAGCTCGG CCGTTCGCCG AGCGAGAACT GGCTGTTGCG GGCGCTGCGC AATTTGTTCG GCTGGAAGGG CGGCGGTTCG GTACGCGATG ACCTGCAGGT CGTGCTCGAC GCCTCGACGC CGGATGACAT CGGCTTCTCT GCGGTCGAAC GCACGCTCCT GCGCAACATC CTCGACCTGC ACGAGCGGCG CATCGCCGAC GTGATGGTGC ATCGCGCCGA CATCGTCGCG GTCAGGCGTG ATATCCCGCT TGGCGAGCTG ATGAGCCTGT TCGAAAGCGC GTCGCACTCG CGGCTCGTCG TCTACAACGA CACGCTGGAC GATCCAGAGG GCATGGTCCA CATCCGCGAC CTGCTGGCCT TCATGACGGC GCAGGCCCGC GTCTCCGACG AGGCGAAGGC CAGACGCAAG AAGCCGCTGC CCGCCGGCCT CGATCTCAAG ACCGTCGATC TCGCGATGCC GCTGTTCGAG GCCAACATCA TCCGCAAGCT GCTCTACGTG CCGCCCTCGA TGCGCGCGAT CGACCTGCTG GCGCAGATGC AGGCCTCGCG CATCCATCTC GCACTCGTCG TGGACGAATA TGGCGGCACC GACGGGCTGG TTTCGATCGA GGACATCGTC GAGCAGATCG TCGGCGAGAT CGATGACGAG CATGACAGCG ACGAGCCGCC GGCGATCATG CGACAGGCCG ACAACGCCTT CATCGCCGAT GCCCGCGCCA GCCTCGACGA TGTGCGCCGG GTGATCGGCG AGGAGTTCGT AACCGGCGAG GCCGGCGAAG GCGTTGAGAC GCTCGGTGGC TACCTGGTGA ACCATGTCGG CCGCTTGCCG GTGCGTGGCG AGCTGATTTC CGGCCCCGGC AATTTCGAGG TCGAGGTGCT GGATGCCGAT CCGCGCCGGG TCAAGCGGCT GCGCATCGCG CCGCGCAAGG AGCGACCCGT CCCGCGTCCG CCGCGCGAGA GCCGGCGTCG CGGCGAAGCC TCCGGCGAGA GCAATGAGGT GATCGAGCCG CCGCGGGCCG CCGAGGGCGG CAAGCCGCCG GGCGCCGACG ACGACAATCC GCCCGCAACC GACGGAGCCA GCCCGCAGTG A
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Protein sequence | MADSEPIHDN PRQTRNLPAV VPPAELGRSP SENWLLRALR NLFGWKGGGS VRDDLQVVLD ASTPDDIGFS AVERTLLRNI LDLHERRIAD VMVHRADIVA VRRDIPLGEL MSLFESASHS RLVVYNDTLD DPEGMVHIRD LLAFMTAQAR VSDEAKARRK KPLPAGLDLK TVDLAMPLFE ANIIRKLLYV PPSMRAIDLL AQMQASRIHL ALVVDEYGGT DGLVSIEDIV EQIVGEIDDE HDSDEPPAIM RQADNAFIAD ARASLDDVRR VIGEEFVTGE AGEGVETLGG YLVNHVGRLP VRGELISGPG NFEVEVLDAD PRRVKRLRIA PRKERPVPRP PRESRRRGEA SGESNEVIEP PRAAEGGKPP GADDDNPPAT DGASPQ
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