Gene BBta_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0048 
Symbol 
ID5153439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp48557 
End bp49066 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content66% 
IMG OID640555078 
Producthypothetical protein 
Protein accessionYP_001236257 
Protein GI148251672 
COG category[R] General function prediction only 
COG ID[COG0319] Predicted metal-dependent hydrolase 
TIGRFAM ID[TIGR00043] metalloprotein, YbeY/UPF0054 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACAAA GTCCCATTCC AACCACCGAG GTGATCATCG CGGCCGACTG CTGGCAGGAC 
CAGCCCGACG CCGAGGACGT CATACATCGC GCGATCCTCG CCGCCGCGGA AAGGGTCGAC
GCCGAGGTCG GCGACGCCGA GATCGCGGTG ATGCTGACGG ACGATGCCGG CATCCGCACC
TTGAACAGCA ATTGGCGCGG CATCGACAAG CCGACCAACG TGCTGTCATT TCCGGCGCTG
CAGCCGACCG GGCCCCGCGG CGACGATGAC GCGCCGCGAA TGCTCGGCGA CATCGCGATC
GCCTATGAGA CGATGCGCCG CGAGGCCGAC GAGGAGCAGA AGCCGTTCGA CCACCATCTC
AGCCACCTCA CTGTGCACGG CTTCCTGCAC CTGATCGGCT ACGATCATGA GAGCGATGCC
GAGGCTGAGG AGATGGAGGC GCTGGAGACC GAGATCCTGG CGCATCTCGG CGTCCCCGAT
CCCTATGCCG ACCGCGAGCG GTTGGACTGA
 
Protein sequence
MPQSPIPTTE VIIAADCWQD QPDAEDVIHR AILAAAERVD AEVGDAEIAV MLTDDAGIRT 
LNSNWRGIDK PTNVLSFPAL QPTGPRGDDD APRMLGDIAI AYETMRREAD EEQKPFDHHL
SHLTVHGFLH LIGYDHESDA EAEEMEALET EILAHLGVPD PYADRERLD