Gene BBta_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_0043 
Symbol 
ID5153460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp44307 
End bp44789 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content63% 
IMG OID640555073 
Productputative ribosomal-protein-alanine acetyltransferase, RimI-like protein 
Protein accessionYP_001236252 
Protein GI148251667 
COG category[R] General function prediction only 
COG ID[COG0456] Acetyltransferases 
TIGRFAM ID[TIGR01575] ribosomal-protein-alanine acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.583173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.569351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGC TGTTCCGCTG GTTTGGACGC TCCAAACCGT CGATCCAGGC CGCCTCCCCG 
GGCGACGCCG CTCGGCTGGC CCAGATCCAT GCCGCATCGT TTCACCGTGG CTGGGGTGAG
GGCGAGTTCG AGTCGATGCT CGCCGAGCGC AACACGATGG TCCACCGGCT GCGCCTCGGG
CGTCGCGTCA TCGGCTTCAT CGTCTCGCGG ATCGGCGCCG ACGAGGCGGA AATTTTATCG
ATTGCACTTG ACCCAAATCA GCGCGGCCGT GGATTTTCTC GTGATCTGTT GCTGCAACAT
CTGGGGCATC TGGCGGGCCG CGGCGTGCGC ACAGTTTTCC TCGAAGTCGA GGAGAACAAC
CAGCCCGCGC GCAGACTCTA TGAACGCGCC GGATTTGCGA CCGTCGGCCG ACGGGAACGC
TATTACCTGC AGCCCGGCGG GGAACAGTTG AATGCGCTTC TGATGCGCCG GGACTTGTCG
TAA
 
Protein sequence
MNMLFRWFGR SKPSIQAASP GDAARLAQIH AASFHRGWGE GEFESMLAER NTMVHRLRLG 
RRVIGFIVSR IGADEAEILS IALDPNQRGR GFSRDLLLQH LGHLAGRGVR TVFLEVEENN
QPARRLYERA GFATVGRRER YYLQPGGEQL NALLMRRDLS