| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_7661 |
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| Symbol | nac |
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| ID | 7380301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011981 |
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| Strand | - |
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| Start bp | 596173 |
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| End bp | 597078 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 643641653 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_002539950 |
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| Protein GI | 222102911 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATATCA GGCGCTTCAA ATCCTTCATC GTGATTGTCG ATACAGGCAG CATTACCCGT
GCGGCCGATA TTCTGCATAT CGCTCAGCCC GCCTTGAGCC AGCAACTTGC CTCGCTGGAA
GAACATTTCG GCACGAAGCT TTTGCTGCGC AGCCAGCAAG GCGTGGTGAT GACCGATGCG
GGCGCGCAAG TCTATCGTCA TGCGCAGATG ATTCTGCGGC AGATGGATCA GGCCCATGCC
GATGTGCTGG CCGCAGGCAA GCATTTGGCC GGGCGGGTCT CGGTGGGTCT GGCTCCGTTT
AGCAGCGCGG CAACGCTCTC GTTTGAGTTG CTGGCGGAAA CACGCAGGCT TTATCCGGGC
ATTGTGCTGC ATCTGACCGA AAGCGTGGGG CAGGCCTATA GCCAAATGTT GATGAACAAC
AAGCTTGAAA TCGCCCTCAT CCACGGCACC GGACCCATGA AGGGTGTTCA CTTCGATCCT
TTACTGCGCG AAGATTTCTT TCTGGTGGCC CATGAGGATT TTGGCATTGA GGCCGATGAC
AAGCCGCTCT CGGTCGCCAA TCTGGAAGAG CTGCCTTTTC TGCTGCCGCC GCCGTATAAT
TTTGTGCGCC GTGCCGTGGA TATGGCCTTT GCCCGCAGCC GTACCAAGCT GAACGTGATT
GGCGAGGTAG AGGTTATTCG CACCCTGACG CGGGCAGTCA GTGGCGGTGT TGGGGCAACT
ATCATGCCCA AGGCGGTGGC TGATCGCATC ACCGCAGAGG CAAGCAGCCA GATCATCTGC
CGCACCCTGT CGCCGCAGAT TGAAGAAACC CTGTCACTCT GTGTGTCTGA ACACGCGCAA
TTGTCAGACT CAGCCGTGGC CGTCAGGGAT ATTTTGCTGC GTTTGACGCG GCAGTTGAAG
AATTAG
|
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| Protein sequence | MDIRRFKSFI VIVDTGSITR AADILHIAQP ALSQQLASLE EHFGTKLLLR SQQGVVMTDA
GAQVYRHAQM ILRQMDQAHA DVLAAGKHLA GRVSVGLAPF SSAATLSFEL LAETRRLYPG
IVLHLTESVG QAYSQMLMNN KLEIALIHGT GPMKGVHFDP LLREDFFLVA HEDFGIEADD
KPLSVANLEE LPFLLPPPYN FVRRAVDMAF ARSRTKLNVI GEVEVIRTLT RAVSGGVGAT
IMPKAVADRI TAEASSQIIC RTLSPQIEET LSLCVSEHAQ LSDSAVAVRD ILLRLTRQLK
N
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