Gene Avi_7148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvi_7148 
Symbol 
ID7380184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAgrobacterium vitis S4 
KingdomBacteria 
Replicon accessionNC_011981 
Strand
Start bp114792 
End bp115490 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content54% 
IMG OID643641262 
Producttransposase 
Protein accessionYP_002539559 
Protein GI222102520 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATTT CTTCGTCTAC CTTCGCCTCC TATCGTTACA AACGTCACCG CTTTCCAGCC 
GAGATTATCG CTCACGCGGT TTGGCTGTAC TTCCGGTTTC CATTGAGCCT GCGGCATGTC
GAGGATTTGC TGGCCGAACG CGGTATTGAC GTTTCGTTCC AGACAGTATC GGAATGGGCC
GCCAAATTTG GCTCCGAGTT TGCTGCGTTG CTTCGCCGGC GCTCAAAGGG CGGCTTTGCC
GATAAATGGC ACCTCGATGA GATGGTGGTA ACCTTCAAAG GCCGGAAATA CTGGCTCTGG
CGCGCCGTCG ATGCTGAAGG CTATATGCTT GAAGCCCTTT TGCAAAGCCG TCGCAACAAA
AAGGCAGCTC TGAAATTGAT GCGCAAATTG CTCAAAGGCC AGGGCCTCAC ACCCCGTGTG
ATGGTGACCG ACAAACTCCG GTCCTACGAT GCCGCTAAAC GCGATATCAT GCCCGGCGTT
GAACATCGTT CGCATAAGGG GCTGAACAAT CGGGCCGAAA ATTCCCATCT ACCCATAAGG
CGGAGAGAAC GGATCATGAT GCGGTTCAAG TCTGCCGCGC AATGCCAACG TTTCGTTTCA
ACCCACGGAC CGATTCCAAT CTCTTTCTGG TTCACCGCAA CATCAAATTG CCGCCGATCA
CCGAACGCTT CGCACCGAGG CTATGGCCGT CTGGCGTGA
 
Protein sequence
MNISSSTFAS YRYKRHRFPA EIIAHAVWLY FRFPLSLRHV EDLLAERGID VSFQTVSEWA 
AKFGSEFAAL LRRRSKGGFA DKWHLDEMVV TFKGRKYWLW RAVDAEGYML EALLQSRRNK
KAALKLMRKL LKGQGLTPRV MVTDKLRSYD AAKRDIMPGV EHRSHKGLNN RAENSHLPIR
RRERIMMRFK SAAQCQRFVS THGPIPISFW FTATSNCRRS PNASHRGYGR LA