Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_7148 |
Symbol | |
ID | 7380184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011981 |
Strand | - |
Start bp | 114792 |
End bp | 115490 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643641262 |
Product | transposase |
Protein accession | YP_002539559 |
Protein GI | 222102520 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3316] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATTT CTTCGTCTAC CTTCGCCTCC TATCGTTACA AACGTCACCG CTTTCCAGCC GAGATTATCG CTCACGCGGT TTGGCTGTAC TTCCGGTTTC CATTGAGCCT GCGGCATGTC GAGGATTTGC TGGCCGAACG CGGTATTGAC GTTTCGTTCC AGACAGTATC GGAATGGGCC GCCAAATTTG GCTCCGAGTT TGCTGCGTTG CTTCGCCGGC GCTCAAAGGG CGGCTTTGCC GATAAATGGC ACCTCGATGA GATGGTGGTA ACCTTCAAAG GCCGGAAATA CTGGCTCTGG CGCGCCGTCG ATGCTGAAGG CTATATGCTT GAAGCCCTTT TGCAAAGCCG TCGCAACAAA AAGGCAGCTC TGAAATTGAT GCGCAAATTG CTCAAAGGCC AGGGCCTCAC ACCCCGTGTG ATGGTGACCG ACAAACTCCG GTCCTACGAT GCCGCTAAAC GCGATATCAT GCCCGGCGTT GAACATCGTT CGCATAAGGG GCTGAACAAT CGGGCCGAAA ATTCCCATCT ACCCATAAGG CGGAGAGAAC GGATCATGAT GCGGTTCAAG TCTGCCGCGC AATGCCAACG TTTCGTTTCA ACCCACGGAC CGATTCCAAT CTCTTTCTGG TTCACCGCAA CATCAAATTG CCGCCGATCA CCGAACGCTT CGCACCGAGG CTATGGCCGT CTGGCGTGA
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Protein sequence | MNISSSTFAS YRYKRHRFPA EIIAHAVWLY FRFPLSLRHV EDLLAERGID VSFQTVSEWA AKFGSEFAAL LRRRSKGGFA DKWHLDEMVV TFKGRKYWLW RAVDAEGYML EALLQSRRNK KAALKLMRKL LKGQGLTPRV MVTDKLRSYD AAKRDIMPGV EHRSHKGLNN RAENSHLPIR RRERIMMRFK SAAQCQRFVS THGPIPISFW FTATSNCRRS PNASHRGYGR LA
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