Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Avi_5042 |
Symbol | |
ID | 7381202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Agrobacterium vitis S4 |
Kingdom | Bacteria |
Replicon accession | NC_011988 |
Strand | - |
Start bp | 33645 |
End bp | 35141 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643648716 |
Product | ABC transporter nucleotide binding/ATPase protein (sugar) |
Protein accession | YP_002546953 |
Protein GI | 222106162 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.650295 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCGACG AAAAACTACT GGAATTTTGT GCGATCACAA AAACCTTCGG CGGAACGCGC GCCCTGTCAA ATGTCTCGCT CGACCTGCGA CCCGGTGAAA TCCTGGCACT GCTTGGCGAA AACGGCGCTG GAAAATCAAC CCTGATCAAG ACCCTCGCAG GTATTTACAA GCCAGACACC GGTGAAATCA GATTTCGTGG ACAGACCTAT AATCACCGGC CACCAAAGCC AAACCAGCGC CAGCCCGTTG CCTTCATTCA TCAAGATCTC GGCCTGATCG AATGGATGAC CGTTGCCGAA AATGTCGGCC TTGCCCAAGG CTACTCACTA CGCAACCGCC TTATCAATTG GAAACAAACC GAACAGCGGA CCGCCGAAGC CCTTGCTCTC GTCGGCTGCA ACTTCGATCC CTCCACACGT ATCCAGAGCC TGACACGGAC AGAAAAATCA CTTGTCGCAA TTGCCCGCGC ACTGGCAGTC GAAGCAGACG TGCTGGTGCT GGATGAGCCG ACGGCCAGCT TACCGGCTGA TGAAGTCGAA AAACTCTTTG CAGCAATCCG CCCATTGAAG GAACGCGGCG TAGCGATGAT TTATGTCTCG CACCGCCTGG ATGAAATCTT CCGTATCGCC GATCGCGTCG CCGTCCTTCG AGACGGACAA TTGGTTGGCG AAAAGCCCGT AACCCAGACG ACACCTGACG AACTGATTAG GATGATCGTC GGGCGCAAGG CCGACCAGCT CTTCACCAAG AGCACAAGTC CGGCGGGACC GGCCATCGTC ACCGTCAGAG ATCTTGGCTG CCGCGGGGCA GGGCCGGTCT CTTTCGACAT CCGGCAAGGT GAATTGCTCG GACTGGTCGG ACTGCGCGGC GCAGGCCACG AATTGGTCGG TCGCGCACTG TTCGGCGCAG AACCCGCCTC TGGCACCGTT ACGATTTCCG GTCGCCCTGT CGATCTCACC AACCCCTCAA CAGCCATGGC CAGTGGGGTC GGATTGATTG CCCGCGACAG AACAGAAGAG TCGGTCGCCA TGTCCCTGAG CCTGCGAGAA AACACCTTCA TTAATCCTGC CGCCTCAGGC CGCCGTCTCC TTTCCTTTCT GACCCCTGCC AAGGAAGCCG CGCAAGCCTA CGCGATTGGC GCGCGCGTCG GCTTGCGGCC AAACGACCAG AGCCTTGCCA TAGAAGCGCT TTCCGGCGGC AACCAACAAA AAGTTGTGGT GGGTCGCTGG CTGGCGACAG GCCGGCGCCT ATTGGTGGCG GAAGATCCGA CTGCCGGTGT CGATGTTGGT GCCAAGGCCG ATATCTATCG CCTGATCGCC GAGGCCGTCG AAGGCGGATT GGCGGTCCTA GTGGTTTCAA CCGATTTTGA AGAAATCGCC CATATCTGCC AGCGGGCGCT GGTATTTTCT CGCGGCCAAA TTTTGAGAGA GCTGAGCGGG CCAGAGTTGA CAACAGAAGC GGTGATCGCC GCAGCCTCCG CCTCGGACGC GGCCTGA
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Protein sequence | MVDEKLLEFC AITKTFGGTR ALSNVSLDLR PGEILALLGE NGAGKSTLIK TLAGIYKPDT GEIRFRGQTY NHRPPKPNQR QPVAFIHQDL GLIEWMTVAE NVGLAQGYSL RNRLINWKQT EQRTAEALAL VGCNFDPSTR IQSLTRTEKS LVAIARALAV EADVLVLDEP TASLPADEVE KLFAAIRPLK ERGVAMIYVS HRLDEIFRIA DRVAVLRDGQ LVGEKPVTQT TPDELIRMIV GRKADQLFTK STSPAGPAIV TVRDLGCRGA GPVSFDIRQG ELLGLVGLRG AGHELVGRAL FGAEPASGTV TISGRPVDLT NPSTAMASGV GLIARDRTEE SVAMSLSLRE NTFINPAASG RRLLSFLTPA KEAAQAYAIG ARVGLRPNDQ SLAIEALSGG NQQKVVVGRW LATGRRLLVA EDPTAGVDVG AKADIYRLIA EAVEGGLAVL VVSTDFEEIA HICQRALVFS RGQILRELSG PELTTEAVIA AASASDAA
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