Gene Avi_1969 details

Gene Information

• Locus tag: Avi_1969
• ID: 7387255
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Agrobacterium vitis S4
• Kingdom: Bacteria
• Replicon accession: NC_011989
• Strand: +
• Start bp: 1624563
• End bp: 1625159
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 643651218
• Product: prohead protease protein
• Protein accession: YP_002549414
• Protein GI: 222148457
• COG category: [R] General function prediction only
• COG ID: [COG3740] Phage head maturation protease
• TIGRFAM ID: [TIGR01543] phage prohead protease, HK97 family

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.839969
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACACCGA AACCGAAACC GGGTGAGCGT GAGCGCCGCT CGTTGGTGCT GCCGGTGGAA 
GCCCGGGGCG ATGGCGAGCG AATGACGGTG GCAGGCTACG CCGCCAATTT TGGTGACGTC 
ACCACCATCG CCGGGGTGTT CGAAGAGACG ATTGCACCAG GCGCTTTTGC CCGGTCGCTG 
CGGTCTGATG ATATCCGCGC CTTCTATGAC CATGACACGG CCCATGTGCT GGGTCGCAAC 
CGGGCGGGCA CGCTACGGAT GTCAGAGGAT GCCAAGGGCC TGGCTGTCGA GATCGATCTT 
CCCGATACCA CGGTCGGGCG CGATGTCCGC ACCCTGATCG CAAGGGGCGA TATCTCCGGC 
ATGTCGTTCG GCTTCGAGGC GATTGGCGAG GAATGGGATT TTTCCAGATC CATGCCGCGC 
CGAACGCTGA CCGACCTCAA CCTGTTCGAA GTCTCCATCG TCTCTATCCC GGCCTATGCC 
GGCACCTCCA TTGCCCTGCG GTCGCTTGAA CACGCCCGTG GAACCGAAAT CCGTTCTCAT 
GGACTGGCCA CGCGCCTGCG CCTGAAAATC GGCCTCGACC TGACGCGGCG CTCGTAA 

 

Protein sequence

MTPKPKPGER ERRSLVLPVE ARGDGERMTV AGYAANFGDV TTIAGVFEET IAPGAFARSL 
RSDDIRAFYD HDTAHVLGRN RAGTLRMSED AKGLAVEIDL PDTTVGRDVR TLIARGDISG 
MSFGFEAIGE EWDFSRSMPR RTLTDLNLFE VSIVSIPAYA GTSIALRSLE HARGTEIRSH 
GLATRLRLKI GLDLTRRS