Gene Ava_4866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4866 
Symbol 
ID3679287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6132915 
End bp6134120 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content45% 
IMG OID637720224 
Productaminotransferase, class V 
Protein accessionYP_325358 
Protein GI75911062 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.403598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000172014 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACTATTT TGAATTCTAA TTTGTCTATG ACTTCTATTT CTACTTTACA GACTAGGTTG 
CACAGCTATC GGGAACAGTT CCCTGCTTTA GCTAATAAGA CCTATTTTAA CTATGGTGGA
CAGGGGCCGA TGCCTCAAGG GGCAATGGAT ATTATTACCC AATCTTTAGC TTATATCCAA
CAAATCGGCC CTTTTGGGAC TGAGGCTGGT AATTGGATAA CGAAGCAAAC TCAAGCTGTG
AGGGAAGCGA TCGCCTCGGA ATTAAACGCC TCTTCTGATA CGATTACTTT TACAGATAAT
GTCACTGTTG GCTGTAATAT CGCTCTTTGG GGCATCCCTT GGCAAGCCGG CGACCATATT
TTACTATCGG ACTGTGAACA TCCAGGGGTA ATTGCTGCTA CCCAAGAAAT TAGCCGACGC
TTTGGGGTGG AAGTTACTAC TTGTCCCCTC AAAGCTACCT TAAATGTAGG CGAACCGACA
GCAATTATCG CCCAGAATTT ACGCAAAAAT ACTCGATTGG TAGTCCTCAG TCATGTCTTC
TGGAATACTG GACAGGTGCT ACCTTTGGAT AAAATTGTTG AGGTATGCAG AAATAATAAC
TCTTTACTAT TAGTCGATGC TGCCCAGTCT GTTGGGGCGT TACCTCTCAA CTTAACGGAG
TTGGGGGTAG ATTTTTACGC TTTTACTGGT CACAAATGGT TATGCGGCCC TGAGGGGGTG
GGCGGTTTGT ATGTGCGACC AGAGGTCAGA GACATCCTCA ACCCTACATT CATCGGTTTG
TATGGAATTA TTGTGGATAA CCAAGCCCAA CCTGTAAGCT GGAAACCGGA CGGGCGCAGG
TATGAAGTAT CTACCCTAGC TTATCCATTA TACCTGGGGT TAAAGGAAGC GATCGCCACT
CATCAGCGAT GGGGAACACC ACAGGAACGT TACGCGCAAA TTTGCCACAA CAGTGAATAC
CTCTGGCGCA GTTTGGCGGC GATACCCAAT GTCAAATGTT TACGTAATAC ACCACCGGAA
ACGGGTATTG TCTCTTTCCA ACTCCACCAA ACCCCATCCC TCAAGCTGGT GCAATTTCTC
GATTCTCAAA AGATATTAAC CCGAACAATT GCCGACCCAA GTTGTATCCG GGTAACTGTT
CATTATTTAA CATTGGAATC GGAAATCGAC CAATTAGTTG AAGCTGTAGC TAGGTTTTCA
CTCTAG
 
Protein sequence
MTILNSNLSM TSISTLQTRL HSYREQFPAL ANKTYFNYGG QGPMPQGAMD IITQSLAYIQ 
QIGPFGTEAG NWITKQTQAV REAIASELNA SSDTITFTDN VTVGCNIALW GIPWQAGDHI
LLSDCEHPGV IAATQEISRR FGVEVTTCPL KATLNVGEPT AIIAQNLRKN TRLVVLSHVF
WNTGQVLPLD KIVEVCRNNN SLLLVDAAQS VGALPLNLTE LGVDFYAFTG HKWLCGPEGV
GGLYVRPEVR DILNPTFIGL YGIIVDNQAQ PVSWKPDGRR YEVSTLAYPL YLGLKEAIAT
HQRWGTPQER YAQICHNSEY LWRSLAAIPN VKCLRNTPPE TGIVSFQLHQ TPSLKLVQFL
DSQKILTRTI ADPSCIRVTV HYLTLESEID QLVEAVARFS L