Gene Ava_4702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4702 
Symbol 
ID3679721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5878222 
End bp5879367 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content41% 
IMG OID637720058 
Productresponse regulator receiver Signal transduction histidine kinase 
Protein accessionYP_325194 
Protein GI75910898 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0901362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGC CCTCTATTCT TGTAATTGAC GATCTACCAG ATAACTTTGA TGTTATTGAA 
ACCCTCTTAA GTGAGCAAGA CTATACACTA CATTATGTTG CTAGTGGTCA AGAGGCGATC
GCCTCCCTCA ACCTATTTCA GCCAGACCTG ATTTTGCTAG ATGTGATGAT GCCGGGAATG
GATGGGATAG AAGTGTGTCA GCGAATTAAA GCCATGCCCC AATGGCAGTC AGTGCCGATC
ATTATGGTAA CAGCCCTCAC CGCCAAAGAA GACCTCGCAC GCTGCTTAAA ATCTGGTGCC
GATGACTTCA TTAGTAAACC TATCAATGCT CTGGAGTTGA GGGCGCGCCT TCATTCAATG
CTGAGGATTA AGCAACAGTA TGACAAAATT CAAACTTTAT CGAATATCCA AACAAGCACC
ATCAAAGTAT TGGAAAGTAC ACTTGATGAA CTGCGCGGCA ATTTAGCTGC TGCCTTACCC
CATGAACTCA ATACACCACT AAATGGTATT GTCGGAACTA TCAGTATACT CATGGCAGAT
ATTGAGAACA TGGACACTGG TGAAATCCAG GAACTTTTAG GCTGGGTAGA TTTATCTGCC
CGTAACCTAG AAAGATTAAT CAAACAATTG CTGCTCTATT TAGAACTAGA ATTATCAACA
AACCAACAGC AAAACATCGC CTCTGAGTCA ACCCACTTTT CCATAGCAGT AATTGAAGCA
ATTTTACAAT CTCATGCTCC AAGTGTTAAT CGCCGCGACG ATCTCATGTT TGCAATTGAG
GAAGCTGAAG TGTCAATCTC GGCTCGATAT CTAGCGATTA TCATCTATGA ATTAGTTGAT
AATGCGCTCA AATTTTCCCG GCGAGGGACA ACCATTAAAA TCAGTAGTCA GGTAGTAGCA
GGAATGTTAA ATGTCTACAT TCATGATTTC GGCCGGGGTA TGACAGAAGA ACAGATATCT
AAAATCGGCG CTTTCATGCA GTTTGAACGC AAAACTTATG AACAGCAAGG TATAGGTATG
GGCTTAAAGC TTGCCAAACA AATCATCGAA AGTCATGGGG GATTGTTCTC AATTTCCAGT
GTCTATAAGA AGGAAACAAT GGTACATATT GCTTTACCTA TTGCCTATTC TAGATACTTA
AGTTAG
 
Protein sequence
MNLPSILVID DLPDNFDVIE TLLSEQDYTL HYVASGQEAI ASLNLFQPDL ILLDVMMPGM 
DGIEVCQRIK AMPQWQSVPI IMVTALTAKE DLARCLKSGA DDFISKPINA LELRARLHSM
LRIKQQYDKI QTLSNIQTST IKVLESTLDE LRGNLAAALP HELNTPLNGI VGTISILMAD
IENMDTGEIQ ELLGWVDLSA RNLERLIKQL LLYLELELST NQQQNIASES THFSIAVIEA
ILQSHAPSVN RRDDLMFAIE EAEVSISARY LAIIIYELVD NALKFSRRGT TIKISSQVVA
GMLNVYIHDF GRGMTEEQIS KIGAFMQFER KTYEQQGIGM GLKLAKQIIE SHGGLFSISS
VYKKETMVHI ALPIAYSRYL S