Gene Ava_3342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3342 
Symbol 
ID3680218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4160393 
End bp4161493 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content46% 
IMG OID637718692 
Productanion-transporting ATPase 
Protein accessionYP_323844 
Protein GI75909548 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0003] Oxyanion-translocating ATPase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0374732 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGA TATTGACATT TTTGGGCAAA AGTGGCGTAG CGCGAACAAA AATAGCGATC 
GCCGCAGCCA AGTCATTGGC AAGTCAAGGC AAGCGGGTAC TTCTAGCAGG ACTGGCAGAA
CCAGTATTGC CCCTCCTGTT AGAGCAAACC CTCACCCCTG ACCCCCAGCA AATTGCCCCC
AATCTAGAAA TTGTACAGTT TCAATCTTCT GTGTTGCTGG AACGCAATTG GGAAGAAGTG
AAAAAACTTG AGGCGCAATA TCTCCGCACG CCCATTATCA AAGAGGTGTA CGGTCAAGAA
CTGGTAGTAT TACCAGGGAT GGACAGCGCC TTAGCCTTAA ATGCGATTCG TGAATATGAT
GCCAGTGGTA AATATGATGC GATCGTCTAC GATGGCACAG GTGACGCTTT CACTTTGCGG
ATGTTGGGGT TACCGGAATC TCTAAGCTGG TACGTACGGC GCTTTCGGCA ATTGTTTGTC
AACTCCGATT TAGGTAAAAC TATTGCCGAA TCACCCTTGA TTCAACCGTT AATTAGCAGC
TTTTTCAACG TCAATTGGAC AGCAGATAAC TTTGCTCAAC CTACCAATCA AGTCAATAAT
TTCCTAGATA AGGGAAAAGA GGCACTGGCT GACCCCAAGC GAGTTGCGGC TTTTTTGGTC
ACTACAGCAG ACCCTCTAGA AGTTGTCAGT GTACGTTATC TATGGGGTAG CGCTCAACAA
ATCGGGTTAA CGATTGGTGG TGTGATCCAG TTATCCTCAC AAACAGAGGG CGACCTATCA
GCAGAATTTA CACCCTTACC TGTGACTGTT GTTCCCGACG TTGCCAAAGG TGACTGGCAA
CCTTTGATAG ATGCCCTCCC TAATTTTGTT GAGCAAGCAG TAAAAGCTCC CCATCCTATT
ACTATCGACA CCCATAATCG TCAGGTACGC CTCTTCTTAC CGGGATTTGA TAAAAAACAA
GTCAAACTCA CCCAGTACGG GCCGGAAGTA ACAGTAGAAG CTGGTGACCA ACGAAGGAAT
ATTTTCTTAC CTCCCGCACT CAGTGGTAAA CCTATCACTG GGGCAAAGTT CCAAAATAAT
TATTTGATCA TTTCTTTTTA G
 
Protein sequence
MALILTFLGK SGVARTKIAI AAAKSLASQG KRVLLAGLAE PVLPLLLEQT LTPDPQQIAP 
NLEIVQFQSS VLLERNWEEV KKLEAQYLRT PIIKEVYGQE LVVLPGMDSA LALNAIREYD
ASGKYDAIVY DGTGDAFTLR MLGLPESLSW YVRRFRQLFV NSDLGKTIAE SPLIQPLISS
FFNVNWTADN FAQPTNQVNN FLDKGKEALA DPKRVAAFLV TTADPLEVVS VRYLWGSAQQ
IGLTIGGVIQ LSSQTEGDLS AEFTPLPVTV VPDVAKGDWQ PLIDALPNFV EQAVKAPHPI
TIDTHNRQVR LFLPGFDKKQ VKLTQYGPEV TVEAGDQRRN IFLPPALSGK PITGAKFQNN
YLIISF