| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2984 |
|---|
| Symbol | |
|---|
| ID | 3681277 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 3702420 |
|---|
| End bp | 3704051 |
|---|
| Gene Length | 1632 bp |
|---|
| Protein Length | 543 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637718330 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_323489 |
|---|
| Protein GI | 75909193 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5305] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.000954014 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTATT TGCCGCATTC TTGTTTCATT ATAAATCTTC ATTTATGTAT GGAAAATAAA
ACATCAGAAG AATGTTATAA AATTCCTAAC TGGTTGCTGA TTATATCAAC AGTCGCACTT
GTTTTGGGAA TATTTTTAAG ATTTTATCAT CTTGAACAAA AAGTTTATTC TTTCGATGAA
ACTTTCTCCT CAACCTATAT TTATGGGCAA CACTCCCAAG CCTACCAAAA TTTTGATAAT
TCTATTCTCA GCATCGGCGA ACTGCAAAAA TATCTCTTCA TAGACGCAAA TAAAACTTTA
ATTCAATCAG TTGAGCAAGT AATTGAAAAA CTTTATGTAT TTCCTCCAAT CTACCCAGTT
TTGACAATTT TATGGTCGTA TTTATTTAAT CATTGGTTTG ATAATGGACT AGTGATTCAA
AGAAGTTTAG CTGCTTTATT AAGCGTGATT GCAATCTGGG GAATCTACTG GTTAGGATTG
GAGTTATTTG CATCTAAAAC TACCGCATTT GTAGCGGCGG TAATTGTAGC TATTTCTCCC
TTTCATTTAC AATATGCCCA AATCATCCGC CCCTATAGTA TTTTGATAGC GACTACAGTC
ATTGCCTGTG GATACCTACT TAAAGCTATA CGGTTTAACA ATTTATTCTG GTGGCTGATT
TATGGATTAA GTCTTGTGAT TGGGCTTTAC TCTAATTTGC TATTTGCACT TGTTTTAGTG
GCTCATACAC TGTACGTCTT GATTAACGAG AACCTTAGAA ATTTAAAAAG TCTCACTGCA
TATTTTTTGA CATTAGGAAT TAGTACCTTA GCTTTTTTAC CTTGGTTATG GGCTTTTATA
AATTCCAGTA TGCTGAAATA TTCGGTTGAA CAAGTGTCTG ATAAAAGTTC TTTGTTTGGG
TTAATCAATG CTTGGTTAAA GGGTATACAG AACCTTTTTA TTGACTTATA TCATCCCTTT
TTTTCGCCTA ATTTTCTCAA AGCTGCCCAG TATTTCTTCG CTCCAATTAT ATTAGCGATC
GCCGCAATTT CTCTCTATAC ACTTTGTCGA TACGCACCGA GAAAAATCAG AAACTTTCTC
CTGGCATTAG CGATCGCCAC AGGAGTCAGC TTGATGGTGA AAGATGTCAT CAGTGGTAGT
TCTATCACCA CCAGAATGCG CTATTTGATT CCTTTCGTTT TAGCTATGGA ATTGATAGCT
GCATACTTGA TTGGTAGTTG GTTGACTGCT AGCCAATCTT CACACAGGCG ATGGGGACAG
TTTGCTTTAT CAATTTTAAT TTTGTGTGGT GTGAGTTCCT GTCTGGTAAT TTCTGCTGCA
CCATCATGGA ATGCCTTTGG TAGTCCCCAT TTTCCCAAAG AGTCGGCAAT CATCAGTTCA
GCCGATCACC CACTAGTTTT ATGCACAAAT CTAGACCGGG CATTATCCAT GAGTTATCTA
GTTGACTCAG ACACTAAATT TAAACTAATT CGAGATGATC TGACAATTCC CGATGGGTTT
AACAGGGTTT TTGTTCTAGA AGCATCAGCA AAAACCCTCA AACAACTAGC AGCCAAACAT
AAATTAGTGA ATACTTTTCC CCAGGGTAGA TTGTTTGAAA TTGCGGGTGT TGTTAGATCC
CCGACTTCTT GA
|
|---|
| Protein sequence | MVYLPHSCFI INLHLCMENK TSEECYKIPN WLLIISTVAL VLGIFLRFYH LEQKVYSFDE
TFSSTYIYGQ HSQAYQNFDN SILSIGELQK YLFIDANKTL IQSVEQVIEK LYVFPPIYPV
LTILWSYLFN HWFDNGLVIQ RSLAALLSVI AIWGIYWLGL ELFASKTTAF VAAVIVAISP
FHLQYAQIIR PYSILIATTV IACGYLLKAI RFNNLFWWLI YGLSLVIGLY SNLLFALVLV
AHTLYVLINE NLRNLKSLTA YFLTLGISTL AFLPWLWAFI NSSMLKYSVE QVSDKSSLFG
LINAWLKGIQ NLFIDLYHPF FSPNFLKAAQ YFFAPIILAI AAISLYTLCR YAPRKIRNFL
LALAIATGVS LMVKDVISGS SITTRMRYLI PFVLAMELIA AYLIGSWLTA SQSSHRRWGQ
FALSILILCG VSSCLVISAA PSWNAFGSPH FPKESAIISS ADHPLVLCTN LDRALSMSYL
VDSDTKFKLI RDDLTIPDGF NRVFVLEASA KTLKQLAAKH KLVNTFPQGR LFEIAGVVRS
PTS
|
|---|
| |