Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2840 |
Symbol | |
ID | 3681482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 3518094 |
End bp | 3520643 |
Gene Length | 2550 bp |
Protein Length | 849 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637718187 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_323348 |
Protein GI | 75909052 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000068938 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.338102 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACCCG GAAAAATACT TTTTCTTCTC TTGCTCACAG GTTCTGTTTG GTCATTAATC AACCATCCTG CAAATAGTCA GGAAGCTCCA TCCCCAACAC CACTCAATAC ACAATCACCA GTACCTAACG CTCAGGAATT GACGCAAGTA ACTGGTGTGA GAGTTGTTCC GACAGCTCAA GGTCTAGAGG TGATATTAGA TAGTACAGCC GCCGAAAAAT TGCAGGTATC AACGCAAAAT CAAGGCAATA GTTTGATTGC TGATATCACT AACGCTCAAC TCAATTTGTC TGGGGAAAAC ACATTCAGCC AAAATAACCC AGTCACAGGC GTAACTACTG TGACTGTGGT TAATCAAAAT GACAATACAA TCCGGGTGAC TGTGACTGGA GAGAAAAGCC TTCCCAAATT TGAGCTATTT GATAGTGATA CAGGTTTAAT TTTGGCATTC ACCGCAACTG AAGTAGCTCA AGATTCCCCC GCCGAAGCGG ATGAACCAAT TGAACTGGTG GTGACAGCAA CGCGTACCGA AACACCTATA CAAAATGTCC CACGTTCCAT CACTGTTATT GACCGCGAAC AAATCGCCGC ACAAGCCAGC ACTTCTCGTA ACCTCATAGA AATTCTGGGG AAAACAGTTC CTGGTTTAGC ACCACCAGCC CAAGGCGCTA GTAATTTTGG TCTAACTCTC AGAGGAAGGA ATCCCCAGGT TTTGATTGAT GGAGTTCCCC AATCGACAAC GAGAAATGCG TCGCGGGATT TGCGGACAAT TGACTCGGCG GCGATTGAAC GAATTGAAGT AGTACGCGGC CCCAGCGCAA TTTATGGTGA TGGTGCAACA GGGGGTGTGA TTAATATCAT CACCAGGCGA CCGACTGAAG AAAAATTAAC CTCCCGGACA GAAGTTGGTG TGAGTGCAGC TTTAGGTAAT TTGTCAGGGG ACAGTTTTAG CACCAACCTA CAGCATTTCA TCTCGGCGAA ACAAGATAAC TTTGATTTTA CCTTTAACTT TGCAGTAGCT AAAACTGGTG GCTTCTTTGA TGCTCAAGGC GATCGCATTC CCTCTGATCC TAATGCCCAA GGAGGCTTTT CTGATGCTTC GAGTATCAAC TTATTTGGTA AGTTTGGTGT TGATATAGAT ACAAATCAAC GTCTCCAACT CACCTTTAAT CGCTTCGACG AAAAACAAGA TACAGATATC GCTAGTGACC CCAGCGTCAA TACTATCCCA GGTAGACAAA AAGCTCGTGC TTTAGAAGGG TTGAGTTTAG ATGAAAGGCC AGGGAATGAG AACACATTCA TCAACCTGCA ATACACCCAT GACGACTTAT TCAATAGCAA ACTACAAGCC CAGTTATATT ACCGAGATTA CCTGACGCGC TTTTTTCCCT TTGATGGGCG TAGCTTTGCT AGTTTGGGTA ACGAAATCTT TCAATCGCGG GTGGAGTCAG AAAAGTATGG GGGACGCTTG CAGATAGAAA CACCTTTATT TAATCAAGGT GCAGCCAAAC TACTTTGGGG TGTAGATTAT TCCCACGAAG ATACCTCTCA ACCTGTATCT GTATTTGATC AAACTGCGTT TGTCGCCAGT GGGGGGTTAG CATTTCGGAA AACAGGCGAT CGCTCCTGGA CTCCTCCTTT AGAATTAAGG AGTCTGGGAT TATTTGCTCA ATTGAATTGG GAAATAAGCG ATCGCTTCGT CTTCAATGGT GGTGTACGCT ACGAAAACGC TGATGTGAGT GTCAATGATT TCCGCACCCT AGCTAATCCC AACGTTACTA TTGGCGGCGG TGATTTGAAC TTTAACGCCA CACTGTTCAA TTTGGGCGCA GTATACGCCC TCAATCCCCA ACTGAGTGTA TTTGCTAACT ATGCTCAAGG TTTCTCCTTA TCAGATATTG GGTTAGCACT CCGCAACGCC CCACCAGGCT TTTCTGTAGA ATCCCTCAAT CCCGAACCGC AAAAAGTAGA TAACTATGAA ATTGGCATTC GTGGACAATG GGACACTATA CAAGCATCAC TTTCGGCTTT TTACAACGAG TCTGACTTAG GTACAACTTT CACAGCACCA GGGACTGTCA TCCGCGCCCC AGAAAGAATC TATGGTCTAG AAGCAGCCAT TGACGCACAA CCTAGTTCTA CATGGCAAGT TGGCGGGACA TTTACTCTTA TTGGTGGGGA AATTGACAGC AATAATGATG GCGATTACGA ATCATTAGAT GGGTTTAGGA TTCCCCCTTT GAAACTTACA GCCTATGTAG AGAATGAGAC CTTACCCGGT TGGCGCAATC GTCTGCAAGC TTTGTACTCT GGTAATAGAG AAGTCTTTGG TAATAACAAT ACGGCCTTTG GTAGGAGACC TGTAGAGAGT TATTTTACTG TAGACTACAT CAGTAGCATT AAACTCGGCG CAGGAACATT ACAACTGGGA TTAGAAAACC TCTTTAATAG TCAATATTTC CCTGTAGCTT CCCAATTGCA AGCCAATGAT AGCGCTTATG CTGCTGCTAG AGGTAGGACT TTGAGTATTA AGTATTCTTT TGATTGGTAA
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Protein sequence | MKPGKILFLL LLTGSVWSLI NHPANSQEAP SPTPLNTQSP VPNAQELTQV TGVRVVPTAQ GLEVILDSTA AEKLQVSTQN QGNSLIADIT NAQLNLSGEN TFSQNNPVTG VTTVTVVNQN DNTIRVTVTG EKSLPKFELF DSDTGLILAF TATEVAQDSP AEADEPIELV VTATRTETPI QNVPRSITVI DREQIAAQAS TSRNLIEILG KTVPGLAPPA QGASNFGLTL RGRNPQVLID GVPQSTTRNA SRDLRTIDSA AIERIEVVRG PSAIYGDGAT GGVINIITRR PTEEKLTSRT EVGVSAALGN LSGDSFSTNL QHFISAKQDN FDFTFNFAVA KTGGFFDAQG DRIPSDPNAQ GGFSDASSIN LFGKFGVDID TNQRLQLTFN RFDEKQDTDI ASDPSVNTIP GRQKARALEG LSLDERPGNE NTFINLQYTH DDLFNSKLQA QLYYRDYLTR FFPFDGRSFA SLGNEIFQSR VESEKYGGRL QIETPLFNQG AAKLLWGVDY SHEDTSQPVS VFDQTAFVAS GGLAFRKTGD RSWTPPLELR SLGLFAQLNW EISDRFVFNG GVRYENADVS VNDFRTLANP NVTIGGGDLN FNATLFNLGA VYALNPQLSV FANYAQGFSL SDIGLALRNA PPGFSVESLN PEPQKVDNYE IGIRGQWDTI QASLSAFYNE SDLGTTFTAP GTVIRAPERI YGLEAAIDAQ PSSTWQVGGT FTLIGGEIDS NNDGDYESLD GFRIPPLKLT AYVENETLPG WRNRLQALYS GNREVFGNNN TAFGRRPVES YFTVDYISSI KLGAGTLQLG LENLFNSQYF PVASQLQAND SAYAAARGRT LSIKYSFDW
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