| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2549 |
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| Symbol | rplS |
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| ID | 3679453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3152228 |
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| End bp | 3152620 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637717894 |
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| Product | 50S ribosomal protein L19 |
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| Protein accession | YP_323059 |
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| Protein GI | 75908763 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0335] Ribosomal protein L19 |
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| TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000000188294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCGTGA GTTTTTTAAA CAAACAGACC ATGAGCGCTC AAGAAATCAT CCGTTCCATA
GAAGCGGAAC AACTAAAATC TAATCTGCCC GAAATTTACA TCGGTGATAC CGTCAGAGTC
GGTGTGAAGA TTAAAGAAGG TGATAAATAT CGTGTGCAAC CCTATGAAGG CGTTGTTATC
GCCAGACGCA ACGGTGGTAT TAACGAAACA ATCACCGTCC GCCGCGTCTT CCAAGGCGTT
GGTGTAGAAC GGGTATTCCT ACTGCACTCA CCCCGGATTG ACAACATCAA AGTACTACGT
CGTGGTAAAG TAAGACGTGC TAAACTGTAT TATCTACGTG GTCGCGTAGG TAAAGCCACC
CGGATCAAGC AACGGTTCGA CCGTTCTCTA TAA
|
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| Protein sequence | MIVSFLNKQT MSAQEIIRSI EAEQLKSNLP EIYIGDTVRV GVKIKEGDKY RVQPYEGVVI
ARRNGGINET ITVRRVFQGV GVERVFLLHS PRIDNIKVLR RGKVRRAKLY YLRGRVGKAT
RIKQRFDRSL
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