| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_2444 |
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| Symbol | |
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| ID | 3683087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 3034506 |
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| End bp | 3036407 |
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| Gene Length | 1902 bp |
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| Protein Length | 633 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637717787 |
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| Product | FtsH peptidase |
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| Protein accession | YP_322954 |
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| Protein GI | 75908658 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000343724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATT TTGGGAAAAA GGCATTGATA AAACAGCAAT CACCAAAGCG CGTTGCTTGG
ACTGGTGCTT TGGCAGCCAG TTTGATTATG TTACCAACGA TGTTTGGCGG TAATCCTGTC
TTAGCGCAAA AAGCAGAGCG TGAGTCTCTG TCATACGGAG AGTTGATTCA AAAAGTTAAT
CAAGAGCAAG TCAAAAGAGT AGAACTGGAC GAAACTGAAC AGATAGCTAA AGTTTATTTA
AAAGGGCAAA AACCAGACGC ACCACCAATA CAGGTGAGGT TGTTGGAGCA GAACAACGAG
TTAATTAACA GACTCAAAGA AAAAAATGTT GATTTTGGTG AGATTTCTTC TGCCAATAGT
AGAGCTGCTG TAGGGTTATT AATTAACCTG ATGTGGATTT TGCCATTGGT GGCTTTAATG
CTGCTATTTC TGCGTCGTTC TACAAATGCT TCTAGCCAAG CAATGAATTT TGGCAAATCT
AGGGCGCGTT TCCAAATGGA AGCCAAGACT GGGGTGAAGT TTGACGATGT AGCGGGTATT
GAAGAAGCGA AGGAAGAATT ACAAGAAGTT GTGACATTCC TCAAGCAGCC AGAAAGATTT
ACGGCTGTGG GTGCGCGGAT ACCTAAAGGT GTGCTGTTGG TGGGGCCTCC AGGTACTGGT
AAAACTTTAC TAGCAAAAGC GATCGCTGGG GAAGCGGCTG TACCATTTTT CAGCATTTCC
GGTTCGGAAT TTGTGGAAAT GTTCGTGGGT GTGGGTGCTT CTCGCGTCCG CGATTTGTTT
AAGAAAGCTA AAGACAATGC GCCTTGTCTG ATATTTATCG ATGAAATCGA TGCAGTTGGC
AGACAACGGG GTACGGGTAT TGGTGGGGGT AACGATGAGA GAGAACAAAC CCTCAATCAG
TTACTCACGG AGATGGATGG TTTTGAAGGT AACACAGGCA TCATTATTAT TGCTGCAACC
AACCGTCCCG ACGTATTAGA TTCAGCTTTG TTACGTCCTG GTCGTTTCGA CAGACAAGTA
ATTGTTGATG CACCAGACTT GAAAGGACGC TTAGAGATTT TGCAAGTCCA TTCACGCAAT
AAGAAAGTTG ACCCCAGTGT ATCACTAGAG GCGATCGCTC GTCGCACACC CGGATTTACA
GGTGCAGATT TAGCCAACTT ACTCAACGAA GCCGCTATCC TCACAGCACG TAGACGCAAA
GAAGCAATTA CGATTCTAGA AATTGATGAC GCTGTTGATA GGGTAGTTGC TGGGATGGAA
GGGACACCCC TAGTAGACAG CAAGAGTAAG CGCTTAATTG CTTACCATGA AGTTGGACAT
GGTTTAGTCG GGACGTTATT AAAAGACCAT GACCCAGTGC AGAAAGTCAC CCTGATTCCC
AGAGGACAAG CACAAGGTTT AACTTGGTTT ACTCCCAACG AAGAACAAGG GTTAATCTCT
CGTTCCCAAC TCAAAGCTAG AATTACTTCT ACTTTGGCCG GTCGTGCTGC TGAAGAAATT
GTCTTTGGTA AGCCAGAAGT GACCACAGGT GCGGGTGATG ACCTGCAAAA AGTCACATCA
ATGGCAAGGC AAATGGTGAC AAGGTTTGGT ATGTCTGAAC TAGGCCCCTT ATCTCTGGAA
AATCAAAGTG GCGAGGTATT TTTAGGACGC GACTGGATGA ATAAATCCGA CTATTCTGAA
GAAATAGCTG CCAAGATAGA TTCTCAAGTC CGAGAAATTA TCAACACCTG TTACCAAACA
TCAAAGGAAC TTTTGCAAAC TAACCGCGTG GTTATGGAAC GACTAGTAGA TTTGTTGACA
GAACAAGAAA CTATTGAAGG TGATTTGTTC CGTAAAATTG TTAGCGAAAG TCAAAACCAA
GTGGTTGATG AGCAATTGTC GATGGTAATG GGTAATGGGT AA
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| Protein sequence | MKNFGKKALI KQQSPKRVAW TGALAASLIM LPTMFGGNPV LAQKAERESL SYGELIQKVN
QEQVKRVELD ETEQIAKVYL KGQKPDAPPI QVRLLEQNNE LINRLKEKNV DFGEISSANS
RAAVGLLINL MWILPLVALM LLFLRRSTNA SSQAMNFGKS RARFQMEAKT GVKFDDVAGI
EEAKEELQEV VTFLKQPERF TAVGARIPKG VLLVGPPGTG KTLLAKAIAG EAAVPFFSIS
GSEFVEMFVG VGASRVRDLF KKAKDNAPCL IFIDEIDAVG RQRGTGIGGG NDEREQTLNQ
LLTEMDGFEG NTGIIIIAAT NRPDVLDSAL LRPGRFDRQV IVDAPDLKGR LEILQVHSRN
KKVDPSVSLE AIARRTPGFT GADLANLLNE AAILTARRRK EAITILEIDD AVDRVVAGME
GTPLVDSKSK RLIAYHEVGH GLVGTLLKDH DPVQKVTLIP RGQAQGLTWF TPNEEQGLIS
RSQLKARITS TLAGRAAEEI VFGKPEVTTG AGDDLQKVTS MARQMVTRFG MSELGPLSLE
NQSGEVFLGR DWMNKSDYSE EIAAKIDSQV REIINTCYQT SKELLQTNRV VMERLVDLLT
EQETIEGDLF RKIVSESQNQ VVDEQLSMVM GNG
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