Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2279 |
Symbol | |
ID | 3678946 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2834085 |
End bp | 2836364 |
Gene Length | 2280 bp |
Protein Length | 759 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637717624 |
Product | glycoside hydrolase family protein |
Protein accession | YP_322792 |
Protein GI | 75908496 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1554] Trehalose and maltose hydrolases (possible phosphorylases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.7939 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGACG ACGTAGATAT ATCTGTGGAA AATTCCCTTG AGCCACTGCT AGATGCTAAC GAATGGAATG TGATTGAGAC AGAGTTTAAC CCTACACAAC TACACCACAA AGAAACTGTC TTCACTCTCA GTAATGGTTA TCTAGGAACC AGGGGAAGTT TTGAGGAAAG TTATCCAGAG GATTTTGCCG CCTCAATGAT TCATGGCATT TATGATGATA CGCAAATTTC CCATACAGAA TTAGTAAATT GTCCTAACTG GTTGCCATTG GTAGTGGAGG TGGCGGGTGA ACAATTTGGC ATGAATTCGG GGGAAATTCT CCATTATGAG CGTCGGTTGG ACTTGCGATT GGGTTTAGTT AGTCGTGATG TGCGTTGGCG TTCTCCCCAA GGTCATACTG TAGATTTGCA TTTTGAACGT TTTGCTAGTT TGGCAGATCA ACACGTATTA GCGATTCGTT GTCAAATCAC ATCTGTAGAT TTTACAGGTG AGATTACAGT CACAGCCACA TTTGATGGGG AACCAAAAAC CCAAGGGACT CCCCATTGGC AAACTTTAAA CCAAGGTGGC GTAGACCAGA TTCTTTGGTT ACAAAGTCAA ACCCTGCATT CTGGCCTTGG TTTGGGAATG AGTGCCAAGT TAATCATAGA TGGTGACGAG ACTGCGGCTG TTTCTGTCAA AAATGCTGAT TTTCCAACTT TGGGGACTAC TTTTGAATGT AACCCAGGAA AAACAGTCAT TGTGGAAAAG ATTGTGACCG TGTTTACTTC CAGAGAAACA GACATCCCCA TTGCAGCCGC ACTAGAAAGA TTAGCTGATG AACCCAGATA CACTACCCTA TTAGCTGCCC ATATTGCTGC TTGGGAGCAA GTTTGGCAAA ATAGCGACAT TATTATTGAA GGCGATCGCC AAGCCCAACT CAGTGTCCGT TACAATCTTT TTCAATTACT ATCCGTAGCA CCAAGCCACG ACGACCATGT AAGTATAGCC CCTAAAACCC TCTCCGGCTT TGCCTATAGC GGACACATCT TTTGGGACAC CGAAATATTT ATCCTCCCCT TCCTCACATT TACCCAACCA GCCTTAGCGC GAAACTTACT CACCTACCGC TACCACACCT TACCAGGCGC AAGACGCAAA GCCCAAGAAG CCGGTTATCA AGGCGCAATG TTTGCTTGGG AAAGTGCTAC AACCGGTGAT GAAGTCACCC CCCGGTGGGT TCCTGGTGCT AATGGTGAGT TAGTAAGAAT TTGGTGCGGT GATATCGAAG TACATATCAC AGCTGACGTA GCTTATGCAG TTTGGCACTA CTGGCAAACT ACCGACGATG ATGAGTGGAT GCACGACTAT GGTGCAGAAA TAATTCTTGA TACAGCCGTG TTTTGGGAAA GTCGCGTCCA GTGGAATCAA CAACGCCACA GTTACGACAT TCTCGATGTG ATTGGCCCCG ATGAAAATCA TGATCGCGTT GATAATAACG CCTTTACCAA CTTGATGGTA CAGTGGCACT TACAATCAGC TTTAGCCCTG TGGGATTGGT TCAAACACGT TTATCCCGAA AAAGCTGCAC AACTAGTAAA ACAACTTAAC TTAACTACAG AACGTCTACA CCGTTGGGCA GAAATTCAAG AACGTATCTT TGTCAATCAA GATATAACCA CAGGTTTAAT CGAACAGTTT GAGGGCTTTT TTCAACTAGA AGATGTCAAC CTAGCTGATT ACGAACCCCG CACAAAATCT TTGCAAGGTT TGTTAGGGAT TGAAGCCACT AGCCAAAAGC AAATACTCAA ACAGCCTGAT GTGTTGATGC TACTTTACTT GCTACGTCAA GCTTACGACT ATAACACCCT CAAAGTTAAC TGGGACTATT ACACCCAACG CACCGACCAT ACTTATGGTT CTTCACTAGG CCCAGCAATT CATGCTGTCT TAGCTTGCGA CCTTAATAAC CCTACAGAAG CCTACACTCA TTTTTTAAGA GCTGCATTAG TAGATTTGGA AGATGTCAGA CTCAATGCCG CCGAAGGAAT CCACGCCGCC AGTGCAGGAG GAGTTTGGCA AGCTGTTGTT TTAGGGTTCG GGGGTGTGAG AATGACTCAA TTTGGCCCGA TGGCTTGTCC TAATCTCCCG TCAACATGGA AACGCTTGAA ATTTAGGCTG CAATGGCGTA ATGAATGGTA TGAGTTTGAT TTACAACCAG AAACAGCAAT GTCAGTAGTG ACACAAGAAG CTTCAGTTCC TGTTTTTGCC ACTGTACAAG CTGTAATGGT TAATGGGTAA
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Protein sequence | MLDDVDISVE NSLEPLLDAN EWNVIETEFN PTQLHHKETV FTLSNGYLGT RGSFEESYPE DFAASMIHGI YDDTQISHTE LVNCPNWLPL VVEVAGEQFG MNSGEILHYE RRLDLRLGLV SRDVRWRSPQ GHTVDLHFER FASLADQHVL AIRCQITSVD FTGEITVTAT FDGEPKTQGT PHWQTLNQGG VDQILWLQSQ TLHSGLGLGM SAKLIIDGDE TAAVSVKNAD FPTLGTTFEC NPGKTVIVEK IVTVFTSRET DIPIAAALER LADEPRYTTL LAAHIAAWEQ VWQNSDIIIE GDRQAQLSVR YNLFQLLSVA PSHDDHVSIA PKTLSGFAYS GHIFWDTEIF ILPFLTFTQP ALARNLLTYR YHTLPGARRK AQEAGYQGAM FAWESATTGD EVTPRWVPGA NGELVRIWCG DIEVHITADV AYAVWHYWQT TDDDEWMHDY GAEIILDTAV FWESRVQWNQ QRHSYDILDV IGPDENHDRV DNNAFTNLMV QWHLQSALAL WDWFKHVYPE KAAQLVKQLN LTTERLHRWA EIQERIFVNQ DITTGLIEQF EGFFQLEDVN LADYEPRTKS LQGLLGIEAT SQKQILKQPD VLMLLYLLRQ AYDYNTLKVN WDYYTQRTDH TYGSSLGPAI HAVLACDLNN PTEAYTHFLR AALVDLEDVR LNAAEGIHAA SAGGVWQAVV LGFGGVRMTQ FGPMACPNLP STWKRLKFRL QWRNEWYEFD LQPETAMSVV TQEASVPVFA TVQAVMVNG
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