Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_2215 |
Symbol | |
ID | 3679694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 2750635 |
End bp | 2752587 |
Gene Length | 1953 bp |
Protein Length | 650 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637717557 |
Product | AAA ATPase, central region |
Protein accession | YP_322728 |
Protein GI | 75908432 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.110333 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTATG TACCCCTGCA CCACAAGTAT CGCCCAAAGA GTTTTGCTGA ACTGGTGGGG CAAGAGGCGA TCGCTACCAC ACTCACAAAT GCTATCCGTA CGGCTAAAAT AGCCCCAGCG TATTTATTTA CTGGCCCCAG AGGTACAGGT AAAACCTCCA GCGCCCGGAT TCTGGCTAAA TCCCTCAACT GTCTCAACAG TGACAAACCC ACAGCCGAAC CCTGTGGCGT TTGTGATGTT TGTCAGGGAA TCACCAAAGG CTACTCCCTG GACGTAATCG AAATTGATGC CGCCAGTAAC ACTGGTGTAG ATAACATCCG CGAATTAATT GAAAAAGCCC AATTCGCCCC CGTGCAGTGT CGGTATAAAG TTTATGTAAT CGACGAATGT CATATGCTCA GTAGTGCGGC ATTCAATGCG TTACTGAAAA CACTGGAAGA ACCACCTAAG CACGTAGTTT TTGTTTTAGC GACAACCGAC CCCCAACGAG TGTTACCCAC GATTATTTCT CGTTGTCAAA GATTTGATTT TCGGCGCATT CAACTAGAGG CGATGGTGAA GCACTTAAGT GCGATCGCCT CAAAGGAAAA TATTAACATT TCCCTAGAAG CTGTCACCTT AGTAGCTCAG TTATCCCAAG GCGGATTACG AGATGCAGAA AGTTTACTCG ACCAATTAGC CTTATTACCT AACGAAGTCA CACCAGAGCA AGTATGGGAT TTAGTCGGTT CAGTCAGCGA ACAAGATTTG TTAGTTTTAT TGGCAGCGAT CGCCCAAGAT AACCCAGAAT TAGTATTAGA CTCTACCAGA CAAATCTTAG ATCGTGGTCG AGAACCCTTA ACCATCCTGC AAAACCTAGC CGCCTTCTAC CGCGATTTAC TCATAGCCAA AACCGCACCC AATCGCCATA ATTTAGTTGC TTGTACTCAG CAGACATGGA ACGCACTAGT TGAATCTGCC CAATCTTTGC CCATAAGTAC CATCTTGCTA GGGCAGAAAC ATTTACAAGA AGCAGAACTG CAAATTAAAC ACACCACTCA ACCACGTTTA TGGTTGGAAG TGACATTACT AGGATTATTA CCAAGCGCCA GTATTCAACC CGCAGCTATA GCCCTGACAC CAAGCAACCA TCGCCCAGCA CCACAGCAAG TTTCCCCAAA AGCACCCCCA CAAAACCCAT CTCCACAACC CCCTCCTCCA CCCCCACCAG AAGCCTCCAC CCGCCAAGAA ACCCCAGACA CACCCCCATC CATCCCATCC CCCATCGTGG AGGAAGTTAA AGCTACATCT TCCCCTGCTC CCCAGTCCTC AATCCCCAGT CCCTCAGAAG ATGACTTTGC TCAAATTTGG CAGCAAGTCC TCAGTAATAT TCAACAAATC CCCAGACGCG CCTTACTGGG TCAAATGTGT TACCTCATCG ATTTTGCAGG TACTGTGGCT CGTATTGGTG TCAAAGCTGC GTGGTATGAC AAAGTCAAGT CAGACTTACC TATGATTACG AGTGCTTTCC AGCAGACTTT TAATCGTGAA GTTCAGGTAA CCTTAGAAAG GGGTAACCCA TCAAACGCTA CTACAGTCAG GAAAGTAGCA CCAGCCAACG GTAATGGTAA CAGCAACGGT AACGGTCATA ACGGTACTTC CAGCGTACAA CAGCCACCGT CACCAACCTA CAGCAACCAA AAGCCGACTA CACCTCTCCC ACAACCTACC GCAACCGCCC CAACTCCAAA AACTACACCA ATAGCCCCAA GTACGGGAGG AGCAAAAACA CCGCCCCCAA AAGAGAACCA AGCACCTCTA CTGGAGTGGG AAACTGATGA AGTGGCGATC GCTGCCCAAC GTCTGGCAAA ATTCTTTGAT GGGCAAATCA TCCGATTTAC TGACGATGGC GAAGCATTAT CAGAAATGGG TACATCTGAG TGGACGGATG AGTCAGATTT AGACGATGAA TAA
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Protein sequence | MSYVPLHHKY RPKSFAELVG QEAIATTLTN AIRTAKIAPA YLFTGPRGTG KTSSARILAK SLNCLNSDKP TAEPCGVCDV CQGITKGYSL DVIEIDAASN TGVDNIRELI EKAQFAPVQC RYKVYVIDEC HMLSSAAFNA LLKTLEEPPK HVVFVLATTD PQRVLPTIIS RCQRFDFRRI QLEAMVKHLS AIASKENINI SLEAVTLVAQ LSQGGLRDAE SLLDQLALLP NEVTPEQVWD LVGSVSEQDL LVLLAAIAQD NPELVLDSTR QILDRGREPL TILQNLAAFY RDLLIAKTAP NRHNLVACTQ QTWNALVESA QSLPISTILL GQKHLQEAEL QIKHTTQPRL WLEVTLLGLL PSASIQPAAI ALTPSNHRPA PQQVSPKAPP QNPSPQPPPP PPPEASTRQE TPDTPPSIPS PIVEEVKATS SPAPQSSIPS PSEDDFAQIW QQVLSNIQQI PRRALLGQMC YLIDFAGTVA RIGVKAAWYD KVKSDLPMIT SAFQQTFNRE VQVTLERGNP SNATTVRKVA PANGNGNSNG NGHNGTSSVQ QPPSPTYSNQ KPTTPLPQPT ATAPTPKTTP IAPSTGGAKT PPPKENQAPL LEWETDEVAI AAQRLAKFFD GQIIRFTDDG EALSEMGTSE WTDESDLDDE
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