| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0989 |
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| Symbol | |
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| ID | 3680018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1189057 |
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| End bp | 1190214 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637716324 |
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| Product | ionotropic glutamate receptor |
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| Protein accession | YP_321508 |
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| Protein GI | 75907212 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00799659 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.390721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAGTG CGATCGCCCA AAAATTTTCT CAATTTCTGG CGGCTAGGAA TATAAGACGT
TTCCTGAAAC TCCATATCTG GTTGGGAATG GTATGCGGAA TTTTACTGTT GTTCCTGGTT
GTTCATCCAG TGCAGTCCCA AGAACCTGAC AATCAAAAAT CCCTAGTCGT AGCTACTAGA
GCTATTCCCC CCTTCGTATT TAATGATAAT GGTGAACTAT CAGGATTCAG TATTGACCTT
TGGCGCAGTA TTGCCAGCCA GATAGGTGCA GAGTCTAAAT TCGTGGAATA TCCGAATGTC
GCTGATTTAC TCTCATCTGT GCGGAATGGT AAAGCCAATG CAGGGATTGC AGCCATCTCA
ATTACAGCTG AACGTCAGCA ACAATTTGAC TTTTCCTTAC CCATGTTTAG TGGGGGATTA
CAGATTTTGG TACGTAATCC CAAACTCAGT AATAGTGGCA CACCTAATAT TTTGTCACTC
TTTTTCTCGA CAACGATCTT ACAAGTGCTT GGCTTGGCTT TGTTCCTTAT TGTTATAGCA
GCACACGTCA TTTGGTTATC TGAGCGTCAT CAAAAAGAAG GTATGATTTC CCCATCCTAC
TTTCCTGGGA TTTTCAAAGC CTGTTGGTGG GCTGCTGCTA CCTTAGCAAC CCAAGCTGAC
GAAATGCCCA AAGGAGTCAT CGGTCGCATA TTAGCTATTA TTTGGATGTT TATTGGTGTA
CTATTTGTCA CTTACTTTAC AGCAGCTGCT ACCACCTCGC TAACTGTGCA ACAGTTACAA
GCAGATATCA ACAGTGTAAG TGATCTACCA GGCAGGGTGG TGGCAACAAC AACCGGCAGC
ACAGCTGCAA CATACTTAAA ACAGCAGAAA ATTTCTGTCT TAGAAGTCCC CAAAATTGAG
CAAGCTTACG ATGCTTTAGA AACAAAAAAA GCTGAAGCTG TTGTTTTTGA CTCTCCTGTA
CTTCTGTTCT ATGCTGCTAA TCAAGGTCAG GGAAAAGTAG AGGTTGTGGG CAGTGTCTTC
CGCGAAGAAA ACTACGGTAT TGTTTTACCT AATAATAGCC CCTACCGTAA ACCTATTAAT
AATGCCTTAC TGAAACTCAA AGAAAATGGC ACTTATCAAT CATTGTATGA TAAATGGTTT
GGGGTCAAGA ACAGTTGA
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| Protein sequence | MISAIAQKFS QFLAARNIRR FLKLHIWLGM VCGILLLFLV VHPVQSQEPD NQKSLVVATR
AIPPFVFNDN GELSGFSIDL WRSIASQIGA ESKFVEYPNV ADLLSSVRNG KANAGIAAIS
ITAERQQQFD FSLPMFSGGL QILVRNPKLS NSGTPNILSL FFSTTILQVL GLALFLIVIA
AHVIWLSERH QKEGMISPSY FPGIFKACWW AAATLATQAD EMPKGVIGRI LAIIWMFIGV
LFVTYFTAAA TTSLTVQQLQ ADINSVSDLP GRVVATTTGS TAATYLKQQK ISVLEVPKIE
QAYDALETKK AEAVVFDSPV LLFYAANQGQ GKVEVVGSVF REENYGIVLP NNSPYRKPIN
NALLKLKENG TYQSLYDKWF GVKNS
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