Gene Ava_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0873 
Symbol 
ID3681735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1067527 
End bp1068717 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content38% 
IMG OID637716207 
Producthistidine kinase 
Protein accessionYP_321392 
Protein GI75907096 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00136581 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0338555 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTA GTCAAGTACT GGCTGACAAT ACTAACATCA TCATCGCCCA ATGGGTTGTG 
GCAGTGCGTG AGGATAGACA GATAGAAAGC GCTGATGATT TATCATACAC AGCCATTAAA
AACCATATTC CTGATGTTTT TAAGGCAATG GTCACAGTAC TTTCACAATC CCAAGAGAGT
GATATCAAAT CTATTGTGAC GGCCAGTTGG CAGCACGGAT TACTACGGGC TGAACAGGGT
TTTGATCCGT CAGAAATTGC CCGTGAATAT CGACTATTAA GAAAAGTTAT ATTTGATACT
ATAGAAGCCG ATTTATTACA GGGAACACCT GCTGAAATTA TTCGTTATAT GCGTTTAATT
GATGCGGTGA TTGATGAAGC GATCGCCAGA TGTTTTCATA GTTATGTTGG GGAACGCTTA
CGGGAATTAG AACATTTGCA AGCCTCATTG GCGCTTCATA ATGAAGAATT AACACGTTTA
GTCACTAGCA ATGAAGATAA ACTATCACAA CTAGCCCACG AACTTAAACA CCCACTAACG
GCAATTATTG GTTACTCAGA TTTATTTTTA CGACAACAAA GGCGAGAAAT TGAAAAAAGA
GATAACACCA CTAATATAGA ACATATTGAG CGCGTATTGC GTAATGGCAG ACTTTTATTA
CGGCTAATTA ATAATGTTCT AGAACTATCG CGGTATGAAG CCGGTAAAAT TCAGTTACAA
TCGGCACCAA TTAATATTCG AGACTTAATT AACAATGTTT GTGAGATGCT GGAACCTTTA
GCGGCGGAGA AGAATTTAGC AATTTTAGTT AATTGGGTAC AAGCACCTAG TGAAATAATT
ACAGATGGTT TTCAATTACA ACAGATTATT ACCAATCTTG TGAGTAATGC AATTCGCTAT
ACAGAGTCAG GAAATATTAG TATAGTCTGT GAAACAGTAG ATGATCAAAA GTGGGCGATC
GCTGTCTCTG ATACAGGAAT TGGCATTGCC GAAAAAGACC AAACTAAGAT ATTTGAACCT
TATTTTCGCG TTAGTTCCAA AGACCGTCCC TACCTTCCTG ACAGTACAGG CTTAGGGTTA
GCAATCGTTG CGCGGTTAGT GAAGCTATTA CAAGGTGAAA TTTACTTAGT CTCAAAAGAA
GGAATAGGTT CCACATTTAC TGTAACTTTA CCTTTAAAAT TAAAAACCTG A
 
Protein sequence
MEFSQVLADN TNIIIAQWVV AVREDRQIES ADDLSYTAIK NHIPDVFKAM VTVLSQSQES 
DIKSIVTASW QHGLLRAEQG FDPSEIAREY RLLRKVIFDT IEADLLQGTP AEIIRYMRLI
DAVIDEAIAR CFHSYVGERL RELEHLQASL ALHNEELTRL VTSNEDKLSQ LAHELKHPLT
AIIGYSDLFL RQQRREIEKR DNTTNIEHIE RVLRNGRLLL RLINNVLELS RYEAGKIQLQ
SAPINIRDLI NNVCEMLEPL AAEKNLAILV NWVQAPSEII TDGFQLQQII TNLVSNAIRY
TESGNISIVC ETVDDQKWAI AVSDTGIGIA EKDQTKIFEP YFRVSSKDRP YLPDSTGLGL
AIVARLVKLL QGEIYLVSKE GIGSTFTVTL PLKLKT