Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_0873 |
Symbol | |
ID | 3681735 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1067527 |
End bp | 1068717 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637716207 |
Product | histidine kinase |
Protein accession | YP_321392 |
Protein GI | 75907096 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00136581 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0338555 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTA GTCAAGTACT GGCTGACAAT ACTAACATCA TCATCGCCCA ATGGGTTGTG GCAGTGCGTG AGGATAGACA GATAGAAAGC GCTGATGATT TATCATACAC AGCCATTAAA AACCATATTC CTGATGTTTT TAAGGCAATG GTCACAGTAC TTTCACAATC CCAAGAGAGT GATATCAAAT CTATTGTGAC GGCCAGTTGG CAGCACGGAT TACTACGGGC TGAACAGGGT TTTGATCCGT CAGAAATTGC CCGTGAATAT CGACTATTAA GAAAAGTTAT ATTTGATACT ATAGAAGCCG ATTTATTACA GGGAACACCT GCTGAAATTA TTCGTTATAT GCGTTTAATT GATGCGGTGA TTGATGAAGC GATCGCCAGA TGTTTTCATA GTTATGTTGG GGAACGCTTA CGGGAATTAG AACATTTGCA AGCCTCATTG GCGCTTCATA ATGAAGAATT AACACGTTTA GTCACTAGCA ATGAAGATAA ACTATCACAA CTAGCCCACG AACTTAAACA CCCACTAACG GCAATTATTG GTTACTCAGA TTTATTTTTA CGACAACAAA GGCGAGAAAT TGAAAAAAGA GATAACACCA CTAATATAGA ACATATTGAG CGCGTATTGC GTAATGGCAG ACTTTTATTA CGGCTAATTA ATAATGTTCT AGAACTATCG CGGTATGAAG CCGGTAAAAT TCAGTTACAA TCGGCACCAA TTAATATTCG AGACTTAATT AACAATGTTT GTGAGATGCT GGAACCTTTA GCGGCGGAGA AGAATTTAGC AATTTTAGTT AATTGGGTAC AAGCACCTAG TGAAATAATT ACAGATGGTT TTCAATTACA ACAGATTATT ACCAATCTTG TGAGTAATGC AATTCGCTAT ACAGAGTCAG GAAATATTAG TATAGTCTGT GAAACAGTAG ATGATCAAAA GTGGGCGATC GCTGTCTCTG ATACAGGAAT TGGCATTGCC GAAAAAGACC AAACTAAGAT ATTTGAACCT TATTTTCGCG TTAGTTCCAA AGACCGTCCC TACCTTCCTG ACAGTACAGG CTTAGGGTTA GCAATCGTTG CGCGGTTAGT GAAGCTATTA CAAGGTGAAA TTTACTTAGT CTCAAAAGAA GGAATAGGTT CCACATTTAC TGTAACTTTA CCTTTAAAAT TAAAAACCTG A
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Protein sequence | MEFSQVLADN TNIIIAQWVV AVREDRQIES ADDLSYTAIK NHIPDVFKAM VTVLSQSQES DIKSIVTASW QHGLLRAEQG FDPSEIAREY RLLRKVIFDT IEADLLQGTP AEIIRYMRLI DAVIDEAIAR CFHSYVGERL RELEHLQASL ALHNEELTRL VTSNEDKLSQ LAHELKHPLT AIIGYSDLFL RQQRREIEKR DNTTNIEHIE RVLRNGRLLL RLINNVLELS RYEAGKIQLQ SAPINIRDLI NNVCEMLEPL AAEKNLAILV NWVQAPSEII TDGFQLQQII TNLVSNAIRY TESGNISIVC ETVDDQKWAI AVSDTGIGIA EKDQTKIFEP YFRVSSKDRP YLPDSTGLGL AIVARLVKLL QGEIYLVSKE GIGSTFTVTL PLKLKT
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