| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0819 |
|---|
| Symbol | |
|---|
| ID | 3682339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 999067 |
|---|
| End bp | 999732 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637716148 |
|---|
| Product | endonuclease V |
|---|
| Protein accession | YP_321338 |
|---|
| Protein GI | 75907042 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1515] Deoxyinosine 3'endonuclease (endonuclease V) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00000867821 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATTT ACCAACCTCA TCCTTGGCCG TTAACGGTGG AAGAAGCCAT AACTATTCAA
GAAGAATTAA GACATCAAGT AATTACACAA GACCAATTTA CACAACCCGT GCAGTACGTC
GCTGGTGTTG ATATGGGTTT TGAAGCTGAT GGCACAATTA GCCGTGCCGC AGTAGCAGTA
CTGAGTTTTC CTGATTTACA AGTTGTCGAA ACTAGCCTAG CGTACCGTCC TACGTCATTT
CCCTACATTC CTGGTTTTCT CTCTTTCCGA GAAATACCAG CAGTACTTGA CGCTCTAGAA
AAAATTCAAA CAAAACCAGA TATTATTTTA TGTGATGGCC AAGGCATCGC CCATCCTCGA
AGGTTAGGTA TAGCTAGTCA CTTAGGAGTA CTACTGAACA TCCCAACAAT TGGTGTAGCC
AAATCTCTAT TAATTGGTAG ACATGAAGAA TTAGCAGACA CCAAAGGCAG TTGGCAACCA
CTCATACACA GAGGTGAAAT TATCGGTGCA GTTTTACGAA CCCGTGTAGG AGTAAAGCCT
GTGTATGTTT CCAGTGGACA TAAAATCAGT TTACCAACCG CTATCGACTA CGTATTGCGA
TGTACACCAA AATACCGCCT ACCAGAAACT ACTCGCGTAG CTGATAAACT AGCATCAAAC
CGATAA
|
|---|
| Protein sequence | MQIYQPHPWP LTVEEAITIQ EELRHQVITQ DQFTQPVQYV AGVDMGFEAD GTISRAAVAV
LSFPDLQVVE TSLAYRPTSF PYIPGFLSFR EIPAVLDALE KIQTKPDIIL CDGQGIAHPR
RLGIASHLGV LLNIPTIGVA KSLLIGRHEE LADTKGSWQP LIHRGEIIGA VLRTRVGVKP
VYVSSGHKIS LPTAIDYVLR CTPKYRLPET TRVADKLASN R
|
|---|
| |