Gene Ava_0656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0656 
Symbol 
ID3678685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp836304 
End bp837203 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content43% 
IMG OID637715984 
ProductAlpha/beta hydrolase fold 
Protein accessionYP_321175 
Protein GI75906879 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.198236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00768241 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTTCAAG CACCGGGATT TGAGCAACGC TCTATAATTA CTTCACTGGG TAAGATGGCG 
TATTACACTG CCACTGGGTC ACTTTGGCAG GACAATAAGA AGACTGATGA CCAAGAAACT
TTGGTGTTTC TGCATGGCTT TGGAGGCGGG TCTTCTGCTT ATGAGTGGTC GAAAGTATAT
CCTGCTTTTG CTTCAGGGTA TCGTGTATTA GCGCCAGATT TAATTGGTTG GGGTGAATCG
GAACATCCAG AACGCAATTA TCTAATTGAA GATTATTTAA CGACTATTCG AGAGTTTTTT
GAGCGGACTT GTACGGGGCC AGTGACAGCG ATCGCCTCTT CTCTCACCGC AGCATTTACA
ATTAGAGTAG CGATCGCACA TCCTGATTTA TTTAAGTCGC TCATTCTTGT CACACCAGCC
GGACTATCTG ACTTTGGCGA AAACTATTCT CGCAGTATTT TTGCTCAAAT CGTCAGTATT
CCTCTTCTGG ATCGTTTACT ATACAGCACT GGAGTGGCTA GTAGTGCAGG TATTCGTAGT
TTCTTAGAAC AACGGCAATT CGCCCAAGCT AACCGAGTAT ATGACGAAAT TGTCGAAGCT
TATCTAAAAT CTGCCCAACA GCCCAATGCT GAGTATGCAG CATTATCATT CGTTCGGGGT
GACTTATGCT TTGATTTATC CCTCTACATT CAACAGTTAA ACACACCCAC AGCCATTATT
TGGGGGCAAA AGTCTCAATT CACTGGACCA GAAATTGGCA GACGTTTGTC CGAACAGAAT
CCCCAAGCAA TTCGAGTGTT TCAAGAATTG GAAAATGTAG GACTAACCCC ACAATTGGAA
CTACCAGCAG TGACAATCGG ACTAATTGAA AAATTCTTAC CTCTACTCAA TAGCCATTAA
 
Protein sequence
MFQAPGFEQR SIITSLGKMA YYTATGSLWQ DNKKTDDQET LVFLHGFGGG SSAYEWSKVY 
PAFASGYRVL APDLIGWGES EHPERNYLIE DYLTTIREFF ERTCTGPVTA IASSLTAAFT
IRVAIAHPDL FKSLILVTPA GLSDFGENYS RSIFAQIVSI PLLDRLLYST GVASSAGIRS
FLEQRQFAQA NRVYDEIVEA YLKSAQQPNA EYAALSFVRG DLCFDLSLYI QQLNTPTAII
WGQKSQFTGP EIGRRLSEQN PQAIRVFQEL ENVGLTPQLE LPAVTIGLIE KFLPLLNSH