| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_0556 |
|---|
| Symbol | |
|---|
| ID | 3682328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 701136 |
|---|
| End bp | 701996 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637715884 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_321075 |
|---|
| Protein GI | 75906779 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.00548789 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0576892 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATG TTAATGTTGG CAAAATTTTC CGGAAATTAA GCAAACAGCA TAAGTTTTTT
CTGCCAAACT TAAGTGCTAA AAATAAACTT CGTAAACCCA TTTTTTTATT AGTGCTGTTA
ACATCACTCC TATTAACTGG CTGTGTGCAG TACGATGTGG GGGTGAATTT TGATAATTCT
AATCATGGTC AACTGGTGCA GCATATCAAA TTGGCAGATA GGCTGACTAG TTTTAGTGGT
GATTATGTAT ACGAATGGTT AACTAGCATA GAACGCCGCG CCCGGAAACT AGAAGGCAAT
GCCAAACGCA TTTCGCCAGA AGAAATCATT GTGACGATTC CTTTTAGTAA TGGTCAGGAA
TTACAAACGA AATTCAACGA ATTTTTTAAT TCCCGCACCC ATCAAACAAA TGACACTGAA
GCAGGTGGAG AAAATTCCGA ATTTCCTAAG GTAGAGTCTA ATTTGTTATT GGCACAAAAT
AACTTTCTTT TGGTAGTCAG AAATCAATTA ATTTATGACT TAGATTTGCG ATCGCTCTCT
TTAATCGCCA ATAAAGGTAA TGTTTTAACA GATACTGGTT CCATTCTTGA TTTAAAATTC
GCCTTAAAAA CACCTTGGGG AGCCAAAAGC ATTGAAAGAA CAGAAACGGC CGTTCCACCA
GAAAAGCAAA GTGGACAGCT GGTATGGCAA TTGCAACCCG GTGAACTCAA CCATATAGAA
GTAGTCTTTT GGCTACCCAG TCCTTTGGGT ATTGGTGCTT TGTTAATTGT CCTGTTTGTT
TGGGGTGGAT TTTACCTGAG GTATAAATTT ATGCCAGACC CCAAACTGCA ATTAGCTAGC
AAATCCGCCG TAGCAGAATA G
|
|---|
| Protein sequence | MNYVNVGKIF RKLSKQHKFF LPNLSAKNKL RKPIFLLVLL TSLLLTGCVQ YDVGVNFDNS
NHGQLVQHIK LADRLTSFSG DYVYEWLTSI ERRARKLEGN AKRISPEEII VTIPFSNGQE
LQTKFNEFFN SRTHQTNDTE AGGENSEFPK VESNLLLAQN NFLLVVRNQL IYDLDLRSLS
LIANKGNVLT DTGSILDLKF ALKTPWGAKS IERTETAVPP EKQSGQLVWQ LQPGELNHIE
VVFWLPSPLG IGALLIVLFV WGGFYLRYKF MPDPKLQLAS KSAVAE
|
|---|
| |