Gene Ava_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_0080 
Symbol 
ID3683433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp101885 
End bp102151 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content40% 
IMG OID637715407 
Producthypothetical protein 
Protein accessionYP_320601 
Protein GI75906305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00889015 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0110811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATAG AAGCTACTTC TGATCCAGTA CGCCAAGAAG CCTTCGCAGG CTTAATCGCT 
CATTTTGTCA ATCAAGGTCA TCCAGTCCAA TATGCTCAAT CAATGGCAAC TTCCGTTATT
TTTCAAACAG ACCTAGATTT AAGAAATGCC CAACTGTCCC GTCTTTTAAA CTGGTTGAAA
CAAGAACACC AAGAGATATA TGCTTCTTCT CTGGTTATAG TTGAAAAAAC CCGTGAGGAA
TTTGAACACC GAGTTCAAGA AGGTTAG
 
Protein sequence
MSIEATSDPV RQEAFAGLIA HFVNQGHPVQ YAQSMATSVI FQTDLDLRNA QLSRLLNWLK 
QEHQEIYASS LVIVEKTREE FEHRVQEG