Gene Apre_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0080 
Symbol 
ID8396831 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp99563 
End bp100249 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content37% 
IMG OID644994419 
Producthypothetical protein 
Protein accessionYP_003151854 
Protein GI257065598 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT TAATTAAAAA TATATGCATC TTACTAGCTT TATCCCTATT TATTAGCTCA 
TGTAGTAATA AAGAAAATAA AGAAGATAAA AATAGTAAGG CAGAAATTAC AGAAAAAGCT
GATCAAAAAT CTAAGAATGA AGAAAAAAAG GAAGAGCAAA AATCCGAGGA TGAGGAAAAA
ATAAAGAAAG ATAAAGAGGA TAAAAAGGAA GAAAAAAAAG AAGCTCCTAA GGATAAGGGT
TCGGAAAATA AGAAGGAGCA AGAAGAAAGT CCTTCTGAAG ATAAAAAAAT CCAAGAGGAC
TCTCCTTCAG AAAACAGAGA TTTCCTAGCT AATGGCCAAT ACTTGACGAT CCTTGACTCT
GAAAGCGGTG GGAAAGCCCA GGGTACTATA GGATATTGCC AAGAAGCCTT CGCAGACGCT
TCTACAAGCA CTTTTACTAT AAAGGGTAGC CTATCCTATA GCGAAGAAGT CGGAGCCTTA
GATGACTACC AAATAATGGC AAATTCGACC TATGACTTCT CCTTTGATGA GGATACAGTC
TTTCAAGCTA CAAGCGGCAT GGCCGAGCCT CAAATCATGA CAGTAGATGA GTTTAACGCC
TACCTAGAAG AATGTAAGGA TACTGGTCTA GGACTTGTAC TCGTCATAGA AAATGGCCTT
GTCAAAAGTG CTAGTATTTC TTCTTAA
 
Protein sequence
MKKLIKNICI LLALSLFISS CSNKENKEDK NSKAEITEKA DQKSKNEEKK EEQKSEDEEK 
IKKDKEDKKE EKKEAPKDKG SENKKEQEES PSEDKKIQED SPSENRDFLA NGQYLTILDS
ESGGKAQGTI GYCQEAFADA STSTFTIKGS LSYSEEVGAL DDYQIMANST YDFSFDEDTV
FQATSGMAEP QIMTVDEFNA YLEECKDTGL GLVLVIENGL VKSASISS