Gene Apre_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0076 
Symbol 
ID8396827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp95768 
End bp96469 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content38% 
IMG OID644994415 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003151850 
Protein GI257065594 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCTTT ATTCTGAGAT TGTAAAAGAC CTTACAGAGA AAATCTCCAC TATGGAAAAG 
GGAGACAAGA TTCCTTCTGA AAGACAGCTT TGCATTGACT ATGATGTGAG TAGGACCACT 
ATTAGAAATG CTATAGGAGA GCTAGTCAAT AGTGGTCTTA TAGTTCAAAT CCAAGGCAAG 
GGGAGTTTTG TTACAGGCAA GCATAATTTG AGGGACAATC TTTCAAATTA CTATTCCTTC 
ACCCAAAGGA CCATAGCCAA TGGTATGAAG CCAAAGTCTG AGATAATCGA CTTTAGGATC 
AAGAAGGCCA ACAAGGATTT GGCAGGACAG ATGAAGCTTG AGAATATGGA CTTGGTCATT 
GAGCTTGTAA GGCTTAGGCT TGCTGATGAT GAGCCTATGA TGTACGAGAC AACTTACATT 
CCCTATGAGA GGTTTACTAA TATTTCTAGG GAGCTTGTAA GTAAAAAGCC CCTCTATGAT 
ATATTTGATG AGTCAAATGC TGCGATTTTC ACAGTAAATG AGAGCTTTTC TGTTGGGAAT 
TTGACTAAAA AGATTGCAGG CTTTTTGGGA CAAAGACCTG ATGCTCCAAG TCTAAAGATT 
ACAAGAAAGA GTTTTGATTT TGACGAGAAT TTACTAGAAT ATACTATATC CTACGCCAGA 
GGAGACAAGT TCTACTATGA AACGAGTTAT AGTCCGAGAT AA
 
Protein sequence
MSLYSEIVKD LTEKISTMEK GDKIPSERQL CIDYDVSRTT IRNAIGELVN SGLIVQIQGK 
GSFVTGKHNL RDNLSNYYSF TQRTIANGMK PKSEIIDFRI KKANKDLAGQ MKLENMDLVI 
ELVRLRLADD EPMMYETTYI PYERFTNISR ELVSKKPLYD IFDESNAAIF TVNESFSVGN 
LTKKIAGFLG QRPDAPSLKI TRKSFDFDEN LLEYTISYAR GDKFYYETSY SPR