Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0044 |
Symbol | |
ID | 8396791 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 53524 |
End bp | 54279 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644994381 |
Product | ABC transporter related |
Protein accession | YP_003151820 |
Protein GI | 257065564 |
COG category | [R] General function prediction only |
COG ID | [COG1101] ABC-type uncharacterized transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGAAA TTAAAAATAT TTCCAAAACT TTCAACATAG GCACAAGTGA AGAAAATACA ATATTTAAGG ACTTCTCCCT AAAGATCGAA GAAGGCCTTG CTACAACCAT CATAGGACCT AATGGCTGCG GTAAGTCAAC CTTGATGAAT CTAATAAGCG GAAGCCTTCC TCTAGATTCA GGACAGATTT TAGTAAATGG GGTAGAGATC AGCAAACTTA GCGAGGAAAA AAGAGCAAAA TATATGGGCA AGGTCAACCA AGATCCCAAA GACGGGGTGG CGACCAACCT AGATATCTAC GAAAATATGG CCCTAGCCCT AAAAAAGGGA GAGAAATTCG GCCTAAGATC TCTTAAGAAA AGCTCTAATA CAGAAGAAAT AGTAAGAAGA CTTAAGAAGT TAAATCTAGG CCTTGAAAAC AAACTCCATA CCAAGACAGA CCTGCTTTCT GGAGGACAAA GACAATCCCT AGCCCTTCTT ATGGCGACAG CTAAAAAGCC GGACCTCTTA TTATTAGACG AGCACACAGC AGCCCTTGAC CCAAAGACCA GTCGAAACAT AATGGACATG ACAAGAAGCC TTATCGATAA GGAAAATATG ACAACCCTCC TAATCTCCCA CAACCTAAGA GACGTTGTCA AATACTCTGA TAGGATAATC ATGCTAAACA AAGGAGAAAT TGTCCTAGAC CTTAGAGCAA AGGACATCAC AGAAGACGAC CTAGTCAAAG CCTATAAGGA AAAATTAGGA GAATAA
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Protein sequence | MLEIKNISKT FNIGTSEENT IFKDFSLKIE EGLATTIIGP NGCGKSTLMN LISGSLPLDS GQILVNGVEI SKLSEEKRAK YMGKVNQDPK DGVATNLDIY ENMALALKKG EKFGLRSLKK SSNTEEIVRR LKKLNLGLEN KLHTKTDLLS GGQRQSLALL MATAKKPDLL LLDEHTAALD PKTSRNIMDM TRSLIDKENM TTLLISHNLR DVVKYSDRII MLNKGEIVLD LRAKDITEDD LVKAYKEKLG E
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