Gene Apre_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0018 
Symbol 
ID8396765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp23213 
End bp24211 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content39% 
IMG OID644994355 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_003151794 
Protein GI257065538 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTAT TAGAAATAAA AAATCTACAC ACCTACTTTG AAACAAGACG TGGTCTTATC 
AAGGCTGTAA ATGACGTATC TTTTACAGTC GATGCTGGTA AGACCCTGGG TCTTGTTGGA 
GAAAGTGGAT CTGGAAAGAG CCAAACAGCT ATGAGTATAC TCCAACTGTT TGAGTCAAAC 
CAAAAGATTT ACGATGGTGA GATAATATTC GATGGAGAAA AAATTTCTGA CTATAAGACT 
AGCCAAATGG AGCATATCAG AGGAAATGCC ATATCTATGA TATTCCAAGA GCCTATGAGC 
TCACTTAACC CAGTCTTTAC CGTAGAAAAA CAAATCTCAG AAGTTCTTAT CCTCCACAAG 
GGAATGAATA AGAAGGAAGC GGCTAAAAGA TGTGAAGAGC TTCTTGCAGC TGTTAAGATC 
CCTAATCCAC ATGTAGTGGC CAAACAATAT CCTTTCGAGC TATCTGGAGG TATGAACCAG 
AGGGTGATGA TCGCCATGGC CCTTGCTTGT GAGCCAAAGC TTCTTATAGC AGATGAGCCT 
ACAACAGCCC TTGACGTTAC AATCCAAGCC CAAATCCTAA GGCTTATGAA TGATCTTAAA 
CATAAGGCTG GTACATCAAT CCTCTTTATT ACCCACGACC TTGGTGTAAT CAATCAAATG 
GCTGATGAAG TTGCTGTAAT GTATTGCGGA CAAATCGTGG AGCAATCTCC AGTTGAATTT 
ATCTTCAAAC ACGATATTAC AGACTTTAAC CACCCATATA CTGTAGCTCT ACTAAATTCA 
ATCCCATCTA TCACATCAGA TAGAAACGAA AGGCTTGATA TCATCCCAGG TTCAGTACCA 
CACCCACTCA ACCTGCCAAA AGGATGCAAG TTTGCAGATA GATGTAAATA CGCTACTAAA 
AAATGTATAG AAGTGATGCC TGATTTAGTT TCAGTAAATG AAAATCAAAA GATCAGATGT 
CATTATCCAA ATAGAAAGGA GAGGGAAGAG AATGAATAG
 
Protein sequence
MSLLEIKNLH TYFETRRGLI KAVNDVSFTV DAGKTLGLVG ESGSGKSQTA MSILQLFESN 
QKIYDGEIIF DGEKISDYKT SQMEHIRGNA ISMIFQEPMS SLNPVFTVEK QISEVLILHK 
GMNKKEAAKR CEELLAAVKI PNPHVVAKQY PFELSGGMNQ RVMIAMALAC EPKLLIADEP 
TTALDVTIQA QILRLMNDLK HKAGTSILFI THDLGVINQM ADEVAVMYCG QIVEQSPVEF 
IFKHDITDFN HPYTVALLNS IPSITSDRNE RLDIIPGSVP HPLNLPKGCK FADRCKYATK 
KCIEVMPDLV SVNENQKIRC HYPNRKEREE NE