Gene Apre_0017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0017 
Symbol 
ID8396764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp21228 
End bp23204 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content40% 
IMG OID644994354 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003151793 
Protein GI257065537 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0118989 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCGA CTTTTAAAAA ATCTGTAAAA TCATATGGAA GTTTCTTGAA AAATTTCTTC 
TTAAGAGCCT TCACATTCTC TAAGGGAGAA GAATTCAATG ATAGTAATTC TTCCTTTGAT
AATAAATCTG ACAATAAATC GGATGATGAA TTACTCCATA GTGATAATAA AAACGTGGAC
AAGGGACCTA GAAAGGAAGA CGAAAATGAT AAGCTAAAAG AAGAAGCTAT CATGTCTCCG
GGCAAGGTAG CCCTTAGAAA CTACTTTAGA AATCCTTTGG GTATTATTGG ACTTGTGCTT
TTTGTAGCGA TTGTCTTAGT AGTATTTGTA GGAAGTAAAG TTCTTCCCTT TAACCAATAC
TACTCCCAAG GAAACTTAAC TAATGTAGGT CCTGGTGGAG CTTATATGAA CTATCCTTCT
GATCTAGAAA AAGAGGGAGT TGAGAAAATT TCTATAGGTA ATACCTTCTC TGCAGGACTT
AGCAAGGGGG GACATCTCTA TGTTTGGGGA TCTGACAACG AAGATAAGGT CCTAGAAATC
CCAGATAAGG CCAAGGAAGC CTTAGCTAAC AAAAAAATAG TAGATATAGC AGCAGGTGAT
AGACATATAA TAGCTGCTAC AGAAGATAAC GAGATATACG GCTGGGGTAA CAATGCCTTC
CAACAAAACC AAATGCCACC AATGGATGAG GCTAAGGTAA AAGAAGAAGG AATAGAAAAA
CTCGGCGCAG GTGTTCAATA CTCAGTAATT CTTACAAAGA AAAACAACCT AGTAGTATGG
GGATCAACCC TTGCAAGTAG ACTTAACCTT CTTCCTTCTG ATATTAAGGG ACAAGTTGTA
GATTTTGCAA CAAATCCAAT CAATATCCTA GCTATAATGA AGGACGGATC TGTCAGACTT
TTGGGTGTAA TGGGTGCAGA AATTGACACT CAAATGCCAG AAGAGCTTAA GACAGGCAAG
GTTAAGACTA AAAAGGTAGC CCTAACTTCC TCATCAGCAG CAGCCCTATC AGAAGATGGC
AATCTTTATG TTTGGGGACC TACTAGAGAT AAGGTTTCAG GAGATTCGAT CCCAAAATTT
GAAGCTCCTC TAGTTGATAT CAAGGCTAGT GATTCAGTGT TCACAGCCCT TGACGAAAAC
GGTAAAATCT ACCAATGGGG TAAGGAAAAC TACGGAGAGC TAAAGACTCC TGAAGGAGAA
TTTGATCAAA TTTATTCTTC ATATTTCAAC AACTACGCAG TAAGTAAAGA AGGCAAAATC
GAAACTTGGG GTCTAAATGG CTTTAGATTT GGTTCTGACG ATCAAGGTCG TGATATTTTC
ACAAGATTAA TCCATGGTGG TAAGATGACC ATGGTAATTT CCTTGATCTC TACTGTAATC
CAAATAGTCC TCGGTGTACT AATCGGTATG ATTTCAGGTT TTGCTGGCGG AAAGATAGAC
AATGTATTGA TGAGATTTTC TGAAATTGTG GCATCCTTCC CATTCTATCC AATGTTGATT
TCCCTATCAG CCCTCCTTCC ACCAGGAGCA AGCCAAGAGC AAAGGATCAC TATGGTTATG
ATTCTTCTAG GTCTACTCGG TTGGACGGGA CTTGCAAGAC TTGTTCGTGG ACAAATCCTT
GCTGAAAGAG AAAGAGACTA TATAACAGCA GCGAGAGCCT TGGGAGTTAA GAATTGGTCT
ATTATGATCA AGCACATCTT CCCAAATATC TTATCAATAG TAATTGTAAA TGCGACTATA
GGTTATGCTG GAAACTTACT AACAGAATCT GGTCTATCCT TCCTAGGTTT TGGTGTACAA
GAACCAACTC CTTCTTGGGG TAATATGCTT ACTGCAGCCC AATCATCAGA CGTACTAAAC
ACTTACTGGT GGAGGTGGGT ATTCCCAGCA CTTGCAGTAT TCTTGACATC ATTTTCTGTA
AACCTAATCG GTGACGCCCT AAGGGATGCC ATCGACCCAA GAGCAAATGA AAGATAG
 
Protein sequence
MNATFKKSVK SYGSFLKNFF LRAFTFSKGE EFNDSNSSFD NKSDNKSDDE LLHSDNKNVD 
KGPRKEDEND KLKEEAIMSP GKVALRNYFR NPLGIIGLVL FVAIVLVVFV GSKVLPFNQY
YSQGNLTNVG PGGAYMNYPS DLEKEGVEKI SIGNTFSAGL SKGGHLYVWG SDNEDKVLEI
PDKAKEALAN KKIVDIAAGD RHIIAATEDN EIYGWGNNAF QQNQMPPMDE AKVKEEGIEK
LGAGVQYSVI LTKKNNLVVW GSTLASRLNL LPSDIKGQVV DFATNPINIL AIMKDGSVRL
LGVMGAEIDT QMPEELKTGK VKTKKVALTS SSAAALSEDG NLYVWGPTRD KVSGDSIPKF
EAPLVDIKAS DSVFTALDEN GKIYQWGKEN YGELKTPEGE FDQIYSSYFN NYAVSKEGKI
ETWGLNGFRF GSDDQGRDIF TRLIHGGKMT MVISLISTVI QIVLGVLIGM ISGFAGGKID
NVLMRFSEIV ASFPFYPMLI SLSALLPPGA SQEQRITMVM ILLGLLGWTG LARLVRGQIL
AERERDYITA ARALGVKNWS IMIKHIFPNI LSIVIVNATI GYAGNLLTES GLSFLGFGVQ
EPTPSWGNML TAAQSSDVLN TYWWRWVFPA LAVFLTSFSV NLIGDALRDA IDPRANER